Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
LITAFQ99732 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LITAFQ99732 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.75□□□□□ -0.21
LITAFQ99732 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 MIR4449-201ENST00000578365 66 ntBASIC13.75□□□□□ -0.21
LITAFQ99732 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.75□□□□□ -0.21
LITAFQ99732 AC137630.3-201ENST00000607245 391 ntBASIC13.75□□□□□ -0.21
LITAFQ99732 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.75□□□□□ -0.21
LITAFQ99732 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.75□□□□□ -0.21
LITAFQ99732 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.75□□□□□ -0.21
LITAFQ99732 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LITAFQ99732 AP006587.3-201ENST00000525742 1516 ntBASIC13.74□□□□□ -0.21
LITAFQ99732 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.74□□□□□ -0.21
LITAFQ99732 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.74□□□□□ -0.21
LITAFQ99732 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.74□□□□□ -0.21
LITAFQ99732 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LITAFQ99732 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LITAFQ99732 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.74□□□□□ -0.21
LITAFQ99732 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.74□□□□□ -0.21
LITAFQ99732 AC010141.3-201ENST00000456659 717 ntBASIC13.74□□□□□ -0.21
LITAFQ99732 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC13.74□□□□□ -0.21
LITAFQ99732 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.74□□□□□ -0.21
LITAFQ99732 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LITAFQ99732 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LITAFQ99732 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LITAFQ99732 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
LITAFQ99732 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 AC092720.2-201ENST00000602388 1665 ntBASIC13.73□□□□□ -0.21
LITAFQ99732 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.73□□□□□ -0.21
LITAFQ99732 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 BEX3-202ENST00000372634 753 ntTSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 AC087239.1-201ENST00000622671 572 ntBASIC13.73□□□□□ -0.21
LITAFQ99732 AC074183.2-201ENST00000623112 922 ntBASIC13.73□□□□□ -0.21
LITAFQ99732 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.73□□□□□ -0.21
LITAFQ99732 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
LITAFQ99732 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.73□□□□□ -0.21
LITAFQ99732 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.73□□□□□ -0.21
LITAFQ99732 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LITAFQ99732 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.73□□□□□ -0.21
LITAFQ99732 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 AC093484.2-201ENST00000580996 2166 ntBASIC13.72□□□□□ -0.21
LITAFQ99732 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 BHLHE23-202ENST00000612929 1109 ntBASIC13.72□□□□□ -0.21
LITAFQ99732 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms