Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP4Q99727 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
TIMP4Q99727 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.92■□□□□ 0.62
TIMP4Q99727 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.92■□□□□ 0.62
TIMP4Q99727 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.92■□□□□ 0.62
TIMP4Q99727 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP4Q99727 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.92■□□□□ 0.62
TIMP4Q99727 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP4Q99727 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.91■□□□□ 0.62
TIMP4Q99727 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.91■□□□□ 0.62
TIMP4Q99727 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP4Q99727 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP4Q99727 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP4Q99727 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TIMP4Q99727 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP4Q99727 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TIMP4Q99727 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 AL355802.2-201ENST00000402069 882 ntBASIC18.9■□□□□ 0.62
TIMP4Q99727 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 AC007322.4-201ENST00000509611 723 ntBASIC18.9■□□□□ 0.62
TIMP4Q99727 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMP4Q99727 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 AC068338.2-201ENST00000563278 1430 ntBASIC18.9■□□□□ 0.62
TIMP4Q99727 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMP4Q99727 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TIMP4Q99727 FEM1AP1-201ENST00000431297 1995 ntBASIC18.9■□□□□ 0.62
TIMP4Q99727 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP4Q99727 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TIMP4Q99727 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TIMP4Q99727 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
TIMP4Q99727 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 TSPY6P-201ENST00000448518 926 ntBASIC18.89■□□□□ 0.61
TIMP4Q99727 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.89■□□□□ 0.61
TIMP4Q99727 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TIMP4Q99727 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.89■□□□□ 0.61
TIMP4Q99727 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TIMP4Q99727 AL049796.1-201ENST00000565336 1766 ntBASIC18.88■□□□□ 0.61
TIMP4Q99727 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TIMP4Q99727 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.88■□□□□ 0.61
TIMP4Q99727 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 AC133552.2-202ENST00000575694 574 ntBASIC18.88■□□□□ 0.61
TIMP4Q99727 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TIMP4Q99727 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TIMP4Q99727 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TIMP4Q99727 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMP4Q99727 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMP4Q99727 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TIMP4Q99727 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TIMP4Q99727 AF201337.1-201ENST00000520239 748 ntBASIC18.87■□□□□ 0.61
TIMP4Q99727 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMP4Q99727 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.87■□□□□ 0.61
TIMP4Q99727 RBM17P2-201ENST00000616397 1405 ntBASIC18.87■□□□□ 0.61
TIMP4Q99727 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TIMP4Q99727 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TIMP4Q99727 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
TIMP4Q99727 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TIMP4Q99727 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TIMP4Q99727 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms