Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 MIR3181-201ENST00000578512 73 ntBASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COX4I2Q96KJ9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AC126544.1-201ENST00000580842 1059 ntBASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AL358852.1-201ENST00000623174 1268 ntBASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AC009086.3-201ENST00000623486 1008 ntBASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.98■□□□□ 0.63
COX4I2Q96KJ9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 AC131274.2-201ENST00000580697 1507 ntBASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COX4I2Q96KJ9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 TSPY26P-201ENST00000476365 1326 ntBASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COX4I2Q96KJ9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.95■□□□□ 0.62
COX4I2Q96KJ9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms