Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM5Q96HC4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 MYCNOS-205ENST00000641950 531 ntBASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM5Q96HC4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 AC020907.5-201ENST00000624372 1936 ntBASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 AC026271.2-201ENST00000428091 497 ntBASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.16■□□□□ 0.82
PDLIM5Q96HC4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 MIR2861-201ENST00000636310 90 ntBASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.15■□□□□ 0.82
PDLIM5Q96HC4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM5Q96HC4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM5Q96HC4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 AC007322.3-201ENST00000426526 701 ntBASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.14■□□□□ 0.81
PDLIM5Q96HC4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 KRT18P11-201ENST00000435214 1283 ntBASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDLIM5Q96HC4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms