Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 AC006970.2-201ENST00000450065 779 ntBASIC21.18■□□□□ 0.98
IFT43Q96FT9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.18■□□□□ 0.98
IFT43Q96FT9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.18■□□□□ 0.98
IFT43Q96FT9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IFT43Q96FT9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CROCCP5-201ENST00000436658 830 ntBASIC21.17■□□□□ 0.98
IFT43Q96FT9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
IFT43Q96FT9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IFT43Q96FT9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IFT43Q96FT9 AF106564.1-201ENST00000607058 2553 ntBASIC21.16■□□□□ 0.98
IFT43Q96FT9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
IFT43Q96FT9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 NCF1B-203ENST00000435988 1254 ntBASIC21.15■□□□□ 0.98
IFT43Q96FT9 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.15■□□□□ 0.98
IFT43Q96FT9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 MFSD11-216ENST00000590393 1141 ntBASIC21.15■□□□□ 0.98
IFT43Q96FT9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.15■□□□□ 0.98
IFT43Q96FT9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFT43Q96FT9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
IFT43Q96FT9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
IFT43Q96FT9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IFT43Q96FT9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IFT43Q96FT9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 AC104771.1-201ENST00000603335 964 ntBASIC21.14■□□□□ 0.97
IFT43Q96FT9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
IFT43Q96FT9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
IFT43Q96FT9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms