Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNFT2Q96EX2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNFT2Q96EX2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
RNFT2Q96EX2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.66■□□□□ 0.58
RNFT2Q96EX2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNFT2Q96EX2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 AC136469.2-201ENST00000623944 1028 ntBASIC18.65■□□□□ 0.58
RNFT2Q96EX2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNFT2Q96EX2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RNFT2Q96EX2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNFT2Q96EX2 AC112907.3-201ENST00000577781 2400 ntBASIC18.64■□□□□ 0.58
RNFT2Q96EX2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 AL512631.2-201ENST00000604634 923 ntBASIC18.64■□□□□ 0.57
RNFT2Q96EX2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 FP700111.2-201ENST00000619190 1892 ntBASIC18.64■□□□□ 0.57
RNFT2Q96EX2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNFT2Q96EX2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 AL512408.1-201ENST00000569378 2000 ntBASIC18.63■□□□□ 0.57
RNFT2Q96EX2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 SMUG1P1-201ENST00000590640 811 ntBASIC18.63■□□□□ 0.57
RNFT2Q96EX2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.63■□□□□ 0.57
RNFT2Q96EX2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.62■□□□□ 0.57
RNFT2Q96EX2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 AL162377.1-201ENST00000618844 1793 ntBASIC18.62■□□□□ 0.57
RNFT2Q96EX2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.62■□□□□ 0.57
RNFT2Q96EX2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.61■□□□□ 0.57
RNFT2Q96EX2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms