Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
RPGRQ92834 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.55■■□□□ 1.68
RPGRQ92834 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RPGRQ92834 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
RPGRQ92834 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPGRQ92834 AC087633.2-202ENST00000565166 1439 ntBASIC25.54■■□□□ 1.68
RPGRQ92834 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
RPGRQ92834 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.54■■□□□ 1.68
RPGRQ92834 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.54■■□□□ 1.68
RPGRQ92834 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.54■■□□□ 1.68
RPGRQ92834 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.54■■□□□ 1.68
RPGRQ92834 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 REXO1L12P-201ENST00000622156 912 ntBASIC25.54■■□□□ 1.68
RPGRQ92834 C9orf163-202ENST00000624034 2573 ntBASIC25.54■■□□□ 1.68
RPGRQ92834 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RPGRQ92834 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.54■■□□□ 1.68
RPGRQ92834 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RPGRQ92834 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.53■■□□□ 1.68
RPGRQ92834 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.53■■□□□ 1.68
RPGRQ92834 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.53■■□□□ 1.68
RPGRQ92834 MTDHP1-201ENST00000605323 784 ntBASIC25.53■■□□□ 1.68
RPGRQ92834 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
RPGRQ92834 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.53■■□□□ 1.68
RPGRQ92834 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.52■■□□□ 1.68
RPGRQ92834 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RPGRQ92834 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RPGRQ92834 AC211429.1-201ENST00000415277 523 ntBASIC25.52■■□□□ 1.68
RPGRQ92834 AC012618.2-201ENST00000428058 849 ntBASIC25.52■■□□□ 1.68
RPGRQ92834 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.52■■□□□ 1.68
RPGRQ92834 AL023875.1-201ENST00000640777 796 ntBASIC25.52■■□□□ 1.68
RPGRQ92834 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.52■■□□□ 1.68
RPGRQ92834 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPGRQ92834 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.68
RPGRQ92834 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
RPGRQ92834 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RPGRQ92834 RPS2P55-201ENST00000397318 883 ntBASIC25.51■■□□□ 1.67
RPGRQ92834 AC107956.1-201ENST00000494359 873 ntBASIC25.51■■□□□ 1.67
RPGRQ92834 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.51■■□□□ 1.67
RPGRQ92834 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
RPGRQ92834 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
RPGRQ92834 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.51■■□□□ 1.67
RPGRQ92834 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.51■■□□□ 1.67
RPGRQ92834 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.51■■□□□ 1.67
RPGRQ92834 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.51■■□□□ 1.67
RPGRQ92834 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.51■■□□□ 1.67
RPGRQ92834 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.51■■□□□ 1.67
RPGRQ92834 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPGRQ92834 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RPGRQ92834 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RPGRQ92834 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPGRQ92834 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RPGRQ92834 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
RPGRQ92834 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.5■■□□□ 1.67
RPGRQ92834 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPGRQ92834 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.5■■□□□ 1.67
RPGRQ92834 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.5■■□□□ 1.67
RPGRQ92834 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RPGRQ92834 AC233702.5-201ENST00000584107 538 ntBASIC25.5■■□□□ 1.67
RPGRQ92834 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.5■■□□□ 1.67
RPGRQ92834 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
RPGRQ92834 AC124016.1-201ENST00000609552 612 ntBASIC25.5■■□□□ 1.67
RPGRQ92834 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.49■■□□□ 1.67
RPGRQ92834 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms