Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AC005229.4-201ENST00000610085 2198 ntBASIC20.98■□□□□ 0.95
CHD5Q8TDI0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 DUSP5P2-201ENST00000426873 1033 ntBASIC20.97■□□□□ 0.95
CHD5Q8TDI0 AC105036.2-201ENST00000569468 176 ntBASIC20.97■□□□□ 0.95
CHD5Q8TDI0 KRT17P1-201ENST00000399211 1546 ntBASIC20.97■□□□□ 0.95
CHD5Q8TDI0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 AC083906.2-201ENST00000511578 360 ntBASIC20.97■□□□□ 0.95
CHD5Q8TDI0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 AC083880.1-201ENST00000608266 535 ntBASIC20.97■□□□□ 0.95
CHD5Q8TDI0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CHD5Q8TDI0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD5Q8TDI0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 BX276092.2-201ENST00000417668 665 ntBASIC20.95■□□□□ 0.94
CHD5Q8TDI0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
CHD5Q8TDI0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 MYC-209ENST00000641252 345 ntBASIC20.95■□□□□ 0.94
CHD5Q8TDI0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHD5Q8TDI0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 AL355802.2-201ENST00000402069 882 ntBASIC20.94■□□□□ 0.94
CHD5Q8TDI0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD5Q8TDI0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 PLK5-205ENST00000642079 1969 ntBASIC20.93■□□□□ 0.94
CHD5Q8TDI0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 AC008694.1-202ENST00000636953 945 ntBASIC20.93■□□□□ 0.94
CHD5Q8TDI0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD5Q8TDI0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.93■□□□□ 0.94
CHD5Q8TDI0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms