Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CCHCR1Q8TD31 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.41■■□□□ 1.02
CCHCR1Q8TD31 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CCDC92B-201ENST00000575506 885 ntBASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 AC007225.1-201ENST00000566331 1836 ntBASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.4■■□□□ 1.02
CCHCR1Q8TD31 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCHCR1Q8TD31 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCHCR1Q8TD31 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CCHCR1Q8TD31 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCHCR1Q8TD31 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 AC026271.2-201ENST00000428091 497 ntBASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 TERF1P2-201ENST00000583350 1212 ntBASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCHCR1Q8TD31 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms