Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 RBM17P1-201ENST00000453646 1190 ntBASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 SLC25A3P1-201ENST00000443844 931 ntBASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 AC010947.1-201ENST00000623454 693 ntBASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 AC079598.2-202ENST00000546624 1451 ntBASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 MMP23A-201ENST00000234610 1017 ntBASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 AC006011.2-201ENST00000621313 1158 ntBASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 AC003102.1-202ENST00000563394 1796 ntBASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ALMS1Q8TCU4 CYP2D8P-201ENST00000433633 1490 ntBASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 AF186192.3-201ENST00000583427 947 ntBASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 FAM197Y1-201ENST00000421178 764 ntBASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ALMS1Q8TCU4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 CYP21A1P-202ENST00000354927 1481 ntBASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ALMS1Q8TCU4 AC006557.6-201ENST00000623071 864 ntBASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 HTR7P1-201ENST00000538670 1336 ntBASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 NUDT16P1-203ENST00000513809 620 ntBASIC14.04□□□□□ -0.16
ALMS1Q8TCU4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.03□□□□□ -0.16
ALMS1Q8TCU4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms