Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 KRT16P3-201ENST00000439127 1283 ntBASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3IL1Q8TBN0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 MIR3621-201ENST00000580529 85 ntBASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RAB3IL1Q8TBN0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3IL1Q8TBN0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 AL391422.3-201ENST00000603791 2761 ntBASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 AC136469.2-201ENST00000623944 1028 ntBASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 AL512408.1-201ENST00000569378 2000 ntBASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB3IL1Q8TBN0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3IL1Q8TBN0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms