Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.83■□□□□ 0.61
CNIH3Q8TBE1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNIH3Q8TBE1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNIH3Q8TBE1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CNIH3Q8TBE1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 AC125437.2-201ENST00000625180 2167 ntBASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.81■□□□□ 0.6
CNIH3Q8TBE1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 AP000974.1-201ENST00000623909 2387 ntBASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.8■□□□□ 0.6
CNIH3Q8TBE1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNIH3Q8TBE1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNIH3Q8TBE1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms