Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LINC01006-201ENST00000333319 2292 ntBASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 SLC7A5P2-201ENST00000553010 536 ntBASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMARCC2Q8TAQ2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 AC120498.10-201ENST00000621827 505 ntBASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 KRT16P2-201ENST00000414673 1423 ntBASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC2Q8TAQ2 AC073130.3-201ENST00000624389 2278 ntBASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 AC011484.1-201ENST00000377652 1995 ntBASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 AP005212.1-201ENST00000581547 1997 ntBASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC2Q8TAQ2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMARCC2Q8TAQ2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMARCC2Q8TAQ2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMARCC2Q8TAQ2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
SMARCC2Q8TAQ2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 AC073314.1-201ENST00000568729 2216 ntBASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SMARCC2Q8TAQ2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 AC007225.1-201ENST00000566331 1836 ntBASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 AC026185.1-201ENST00000445748 174 ntBASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.13■■□□□ 1.45
SMARCC2Q8TAQ2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 RAP2CP1-201ENST00000605103 478 ntBASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms