Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 MKRN4P-201ENST00000444706 1521 ntBASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDND2Q8NHS1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 RBM17P2-201ENST00000616397 1405 ntBASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 AC098934.4-201ENST00000564127 592 ntBASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 AC016405.3-201ENST00000607710 860 ntBASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDND2Q8NHS1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDND2Q8NHS1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 AC093787.1-201ENST00000450396 207 ntBASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 MIR4758-201ENST00000577688 71 ntBASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDND2Q8NHS1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 AC026471.6-201ENST00000622954 1905 ntBASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 MIPEPP3-201ENST00000412105 444 ntBASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 AC073210.2-201ENST00000430369 194 ntBASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 AC243732.1-201ENST00000612648 864 ntBASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDND2Q8NHS1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 AL512625.2-201ENST00000417533 625 ntBASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 AL591742.1-201ENST00000604433 565 ntBASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 AC010542.4-201ENST00000563151 1910 ntBASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms