Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 UBE2DNL-204ENST00000602536 740 ntBASIC19.29■□□□□ 0.68
NUP43Q8NFH3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 AC007225.1-201ENST00000566331 1836 ntBASIC19.29■□□□□ 0.68
NUP43Q8NFH3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NUP43Q8NFH3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUP43Q8NFH3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 AC116050.2-201ENST00000612102 1779 ntBASIC19.27■□□□□ 0.68
NUP43Q8NFH3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 RARRES2P6-201ENST00000567333 442 ntBASIC19.27■□□□□ 0.68
NUP43Q8NFH3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUP43Q8NFH3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUP43Q8NFH3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUP43Q8NFH3 FP700111.2-201ENST00000619190 1892 ntBASIC19.26■□□□□ 0.67
NUP43Q8NFH3 RBM17P2-201ENST00000616397 1405 ntBASIC19.26■□□□□ 0.67
NUP43Q8NFH3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 AC026271.2-201ENST00000428091 497 ntBASIC19.26■□□□□ 0.67
NUP43Q8NFH3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 AC243732.1-201ENST00000612648 864 ntBASIC19.26■□□□□ 0.67
NUP43Q8NFH3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP43Q8NFH3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 LINC01006-201ENST00000333319 2292 ntBASIC19.25■□□□□ 0.67
NUP43Q8NFH3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 MYCNOS-205ENST00000641950 531 ntBASIC19.25■□□□□ 0.67
NUP43Q8NFH3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP43Q8NFH3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms