Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTL9Q8NET4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTL9Q8NET4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTL9Q8NET4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTL9Q8NET4 UNC93B4-201ENST00000505679 747 ntBASIC25.51■■□□□ 1.67
RTL9Q8NET4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.51■■□□□ 1.67
RTL9Q8NET4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTL9Q8NET4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.5■■□□□ 1.67
RTL9Q8NET4 AC092368.3-202ENST00000574180 1591 ntBASIC25.5■■□□□ 1.67
RTL9Q8NET4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTL9Q8NET4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL9Q8NET4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.49■■□□□ 1.67
RTL9Q8NET4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
RTL9Q8NET4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTL9Q8NET4 AC133561.1-201ENST00000568600 2415 ntBASIC25.47■■□□□ 1.67
RTL9Q8NET4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.47■■□□□ 1.67
RTL9Q8NET4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.47■■□□□ 1.67
RTL9Q8NET4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RTL9Q8NET4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
RTL9Q8NET4 C2orf69P4-201ENST00000565394 541 ntBASIC25.47■■□□□ 1.67
RTL9Q8NET4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTL9Q8NET4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
RTL9Q8NET4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RTL9Q8NET4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RTL9Q8NET4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTL9Q8NET4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTL9Q8NET4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTL9Q8NET4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms