Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 AP006294.2-201ENST00000641667 209 ntBASIC23.35■■□□□ 1.33
RETREG2Q8NC44 PKD1P6-201ENST00000343738 4769 ntBASIC23.35■■□□□ 1.33
RETREG2Q8NC44 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RETREG2Q8NC44 FEM1AP4-201ENST00000443167 1987 ntBASIC23.34■■□□□ 1.33
RETREG2Q8NC44 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 ESRRAP1-201ENST00000400596 1257 ntBASIC23.33■■□□□ 1.33
RETREG2Q8NC44 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RETREG2Q8NC44 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RETREG2Q8NC44 AC026471.6-201ENST00000622954 1905 ntBASIC23.33■■□□□ 1.32
RETREG2Q8NC44 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.33■■□□□ 1.32
RETREG2Q8NC44 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RETREG2Q8NC44 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
RETREG2Q8NC44 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 DUSP5P2-201ENST00000426873 1033 ntBASIC23.32■■□□□ 1.32
RETREG2Q8NC44 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 AL591742.1-201ENST00000604433 565 ntBASIC23.32■■□□□ 1.32
RETREG2Q8NC44 AC083880.1-201ENST00000608266 535 ntBASIC23.32■■□□□ 1.32
RETREG2Q8NC44 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.32■■□□□ 1.32
RETREG2Q8NC44 AC061975.6-201ENST00000579045 1553 ntBASIC23.31■■□□□ 1.32
RETREG2Q8NC44 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RETREG2Q8NC44 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 RPS2P52-201ENST00000469610 820 ntBASIC23.3■■□□□ 1.32
RETREG2Q8NC44 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RETREG2Q8NC44 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 AL162412.1-201ENST00000567129 965 ntBASIC23.29■■□□□ 1.32
RETREG2Q8NC44 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 MYC-209ENST00000641252 345 ntBASIC23.29■■□□□ 1.32
RETREG2Q8NC44 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms