Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRTM2Q8N967 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRTM2Q8N967 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LRTM2Q8N967 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 MIR3621-201ENST00000580529 85 ntBASIC16.83■□□□□ 0.28
LRTM2Q8N967 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRTM2Q8N967 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRTM2Q8N967 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 AC011298.3-201ENST00000615796 283 ntBASIC16.82■□□□□ 0.28
LRTM2Q8N967 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.82■□□□□ 0.28
LRTM2Q8N967 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.82■□□□□ 0.28
LRTM2Q8N967 AC125437.2-201ENST00000625180 2167 ntBASIC16.82■□□□□ 0.28
LRTM2Q8N967 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRTM2Q8N967 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 SERBP1P1-201ENST00000396021 1160 ntBASIC16.81■□□□□ 0.28
LRTM2Q8N967 KRT16P3-201ENST00000439127 1283 ntBASIC16.81■□□□□ 0.28
LRTM2Q8N967 AC009299.2-201ENST00000482477 511 ntBASIC16.81■□□□□ 0.28
LRTM2Q8N967 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 DUX4L19-201ENST00000557448 1267 ntBASIC16.81■□□□□ 0.28
LRTM2Q8N967 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRTM2Q8N967 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM2Q8N967 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM2Q8N967 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM2Q8N967 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM2Q8N967 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 AC098818.2-201ENST00000564925 2320 ntBASIC16.8■□□□□ 0.28
LRTM2Q8N967 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM2Q8N967 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRTM2Q8N967 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM2Q8N967 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms