Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LSMEM1Q8N8F7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 LINC01006-201ENST00000333319 2292 ntBASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 AC004854.2-201ENST00000608450 1441 ntBASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSMEM1Q8N8F7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSMEM1Q8N8F7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM1Q8N8F7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM1Q8N8F7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 AC073314.1-201ENST00000568729 2216 ntBASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 AC243732.1-201ENST00000612648 864 ntBASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM1Q8N8F7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM1Q8N8F7 KRT19P1-201ENST00000405746 1186 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms