Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 AC079140.4-201ENST00000507448 529 ntBASIC19.29■□□□□ 0.68
CCDC71Q8IV32 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CCDC71Q8IV32 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC71Q8IV32 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 PCDHAC2-203ENST00000615316 3011 ntBASIC19.27■□□□□ 0.68
CCDC71Q8IV32 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.27■□□□□ 0.68
CCDC71Q8IV32 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC71Q8IV32 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC71Q8IV32 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC71Q8IV32 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC71Q8IV32 AC003102.1-202ENST00000563394 1796 ntBASIC19.27■□□□□ 0.67
CCDC71Q8IV32 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 AC006970.2-201ENST00000450065 779 ntBASIC19.26■□□□□ 0.67
CCDC71Q8IV32 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71Q8IV32 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 PKD1P6-201ENST00000343738 4769 ntBASIC19.25■□□□□ 0.67
CCDC71Q8IV32 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.25■□□□□ 0.67
CCDC71Q8IV32 PLK5-205ENST00000642079 1969 ntBASIC19.25■□□□□ 0.67
CCDC71Q8IV32 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms