Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NPAS4Q8IUM7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 PGM5P4-201ENST00000421970 445 ntBASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.23■■□□□ 1.15
NPAS4Q8IUM7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 AC242852.2-201ENST00000615738 1807 ntBASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAS4Q8IUM7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 SNORA78-201ENST00000459373 127 ntBASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.21■■□□□ 1.15
NPAS4Q8IUM7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
NPAS4Q8IUM7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAS4Q8IUM7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 MTDHP1-201ENST00000605323 784 ntBASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 AC073912.3-201ENST00000624414 853 ntBASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAS4Q8IUM7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms