Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 AL591742.1-201ENST00000604433 565 ntBASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
LYSMD3Q7Z3D4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 AC068338.2-201ENST00000563278 1430 ntBASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD3Q7Z3D4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 AC121338.2-201ENST00000622535 1744 ntBASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 AC116050.2-201ENST00000612102 1779 ntBASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD3Q7Z3D4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 AC005181.1-201ENST00000604782 1256 ntBASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 AC016405.3-201ENST00000607710 860 ntBASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD3Q7Z3D4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 AC011484.1-201ENST00000377652 1995 ntBASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 PLK5-205ENST00000642079 1969 ntBASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 MIR663A-201ENST00000385250 93 ntBASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 AC007322.3-201ENST00000426526 701 ntBASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 CROCCP5-201ENST00000436658 830 ntBASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms