Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
LCA10Q71F78 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
LCA10Q71F78 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.08□□□□□ -0.64
LCA10Q71F78 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC11.08□□□□□ -0.64
LCA10Q71F78 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LCA10Q71F78 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
LCA10Q71F78 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LCA10Q71F78 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LCA10Q71F78 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.08□□□□□ -0.64
LCA10Q71F78 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC11.07□□□□□ -0.64
LCA10Q71F78 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.07□□□□□ -0.64
LCA10Q71F78 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LCA10Q71F78 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
LCA10Q71F78 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 LBH-205ENST00000407930 756 ntTSL 2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 MTX2-204ENST00000443241 799 ntTSL 3 BASIC11.07□□□□□ -0.64
LCA10Q71F78 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LCA10Q71F78 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LCA10Q71F78 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LCA10Q71F78 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.07□□□□□ -0.64
LCA10Q71F78 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 PCDHB18P-201ENST00000524813 2368 ntBASIC11.06□□□□□ -0.64
LCA10Q71F78 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LCA10Q71F78 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 AC099398.1-201ENST00000567919 2776 ntBASIC11.06□□□□□ -0.64
LCA10Q71F78 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
LCA10Q71F78 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 AL049812.1-201ENST00000432563 2267 ntBASIC11.06□□□□□ -0.64
LCA10Q71F78 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LCA10Q71F78 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LCA10Q71F78 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
LCA10Q71F78 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 DUX4L18-201ENST00000553347 1267 ntBASIC11.06□□□□□ -0.64
LCA10Q71F78 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms