Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.86■□□□□ 0.45
C11orf88Q6PI97 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 AC099791.2-201ENST00000605725 427 ntBASIC17.86■□□□□ 0.45
C11orf88Q6PI97 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 SERBP1P1-201ENST00000396021 1160 ntBASIC17.85■□□□□ 0.45
C11orf88Q6PI97 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 RARRES2P6-201ENST00000567333 442 ntBASIC17.85■□□□□ 0.45
C11orf88Q6PI97 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 MIR4767-201ENST00000582827 78 ntBASIC17.85■□□□□ 0.45
C11orf88Q6PI97 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
C11orf88Q6PI97 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 AC105265.2-201ENST00000467189 838 ntBASIC17.84■□□□□ 0.45
C11orf88Q6PI97 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 AC136469.2-201ENST00000623944 1028 ntBASIC17.84■□□□□ 0.45
C11orf88Q6PI97 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C11orf88Q6PI97 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.83■□□□□ 0.45
C11orf88Q6PI97 AC004687.1-201ENST00000579003 1625 ntBASIC17.83■□□□□ 0.45
C11orf88Q6PI97 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C11orf88Q6PI97 AFG3L1P-217ENST00000557444 2447 ntBASIC17.83■□□□□ 0.45
C11orf88Q6PI97 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
C11orf88Q6PI97 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C11orf88Q6PI97 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C11orf88Q6PI97 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C11orf88Q6PI97 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MIR5787-201ENST00000611784 55 ntBASIC17.83■□□□□ 0.44
C11orf88Q6PI97 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C11orf88Q6PI97 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C11orf88Q6PI97 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms