Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 MIR6084-201ENST00000622012 110 ntBASIC18.84■□□□□ 0.61
ZNF544Q6NX49 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 HCG11-201ENST00000411553 5696 ntBASIC18.84■□□□□ 0.61
ZNF544Q6NX49 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZNF544Q6NX49 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF544Q6NX49 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF544Q6NX49 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 LINC02228-203ENST00000641970 1355 ntBASIC18.82■□□□□ 0.6
ZNF544Q6NX49 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 AL034346.1-201ENST00000568244 1277 ntBASIC18.82■□□□□ 0.6
ZNF544Q6NX49 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 AC087289.5-201ENST00000586076 3175 ntBASIC18.82■□□□□ 0.6
ZNF544Q6NX49 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF544Q6NX49 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.81■□□□□ 0.6
ZNF544Q6NX49 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF544Q6NX49 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.8■□□□□ 0.6
ZNF544Q6NX49 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms