Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
PPP4R3AQ6IN85 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 AC007322.3-201ENST00000426526 701 ntBASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 AC005181.1-201ENST00000604782 1256 ntBASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 FAM21FP-204ENST00000608637 956 ntBASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 AL137060.1-201ENST00000618151 2648 ntBASIC23.44■■□□□ 1.34
PPP4R3AQ6IN85 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 AC121338.2-201ENST00000622535 1744 ntBASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 CROCCP5-201ENST00000436658 830 ntBASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
PPP4R3AQ6IN85 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 AC016405.3-201ENST00000607710 860 ntBASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.42■■□□□ 1.34
PPP4R3AQ6IN85 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
PPP4R3AQ6IN85 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 PLK5-205ENST00000642079 1969 ntBASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 CYP2T1P-201ENST00000432607 1285 ntBASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 AL050303.2-201ENST00000619798 666 ntBASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PPP4R3AQ6IN85 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.39■■□□□ 1.34
PPP4R3AQ6IN85 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 RARRES2P4-201ENST00000514074 484 ntBASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms