Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HIST2H2AA3Q6FI13 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HIST2H2AA3Q6FI13 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 AC026271.2-201ENST00000428091 497 ntBASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIST2H2AA3Q6FI13 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 KRT18P11-201ENST00000435214 1283 ntBASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 KRT18P61-201ENST00000585825 1298 ntBASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 UBE2DNL-204ENST00000602536 740 ntBASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 AC243732.1-201ENST00000612648 864 ntBASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST2H2AA3Q6FI13 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 KRT18P5-201ENST00000436075 1291 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC137761.2-201ENST00000561729 223 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC145350.3-201ENST00000569033 163 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 MIR5787-201ENST00000611784 55 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 MYCNOS-205ENST00000641950 531 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 AC116050.2-201ENST00000612102 1779 ntBASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST2H2AA3Q6FI13 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 RBM17P2-201ENST00000616397 1405 ntBASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST2H2AA3Q6FI13 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms