Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF1Q5TC12 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF1Q5TC12 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF1Q5TC12 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 AC073314.1-201ENST00000568729 2216 ntBASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 AFG3L1P-217ENST00000557444 2447 ntBASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF1Q5TC12 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms