Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 GUSBP5-201ENST00000418136 578 ntBASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 AC133561.4-201ENST00000566112 224 ntBASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00242Q5T6M2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00242Q5T6M2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 MIR4466-201ENST00000606121 54 ntBASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 AL035685.1-201ENST00000636663 812 ntBASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms