Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC6LQ2NKX8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC6LQ2NKX8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC6LQ2NKX8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC6LQ2NKX8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.83■■□□□ 1.08
ERCC6LQ2NKX8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC6LQ2NKX8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC6LQ2NKX8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
ERCC6LQ2NKX8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC6LQ2NKX8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC6LQ2NKX8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 AP004607.7-201ENST00000527152 1677 ntBASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC6LQ2NKX8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 AL034346.1-201ENST00000568244 1277 ntBASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 AL451085.2-201ENST00000605085 799 ntBASIC21.78■■□□□ 1.08
ERCC6LQ2NKX8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms