Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CFHR3Q02985 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CFHR3Q02985 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 MKRN4P-201ENST00000444706 1521 ntBASIC16.14■□□□□ 0.18
CFHR3Q02985 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.14■□□□□ 0.17
CFHR3Q02985 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CFHR3Q02985 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.14■□□□□ 0.17
CFHR3Q02985 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.14■□□□□ 0.17
CFHR3Q02985 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFHR3Q02985 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.13■□□□□ 0.17
CFHR3Q02985 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 SLC29A4P1-201ENST00000398760 971 ntBASIC16.13■□□□□ 0.17
CFHR3Q02985 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.13■□□□□ 0.17
CFHR3Q02985 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.13■□□□□ 0.17
CFHR3Q02985 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.13■□□□□ 0.17
CFHR3Q02985 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.13■□□□□ 0.17
CFHR3Q02985 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.13■□□□□ 0.17
CFHR3Q02985 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFHR3Q02985 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.12■□□□□ 0.17
CFHR3Q02985 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 AC026310.3-201ENST00000625186 2373 ntBASIC16.12■□□□□ 0.17
CFHR3Q02985 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.12■□□□□ 0.17
CFHR3Q02985 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.12■□□□□ 0.17
CFHR3Q02985 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.12■□□□□ 0.17
CFHR3Q02985 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.12■□□□□ 0.17
CFHR3Q02985 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.12■□□□□ 0.17
CFHR3Q02985 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFHR3Q02985 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CFHR3Q02985 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CFHR3Q02985 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 AC011484.1-201ENST00000377652 1995 ntBASIC16.11■□□□□ 0.17
CFHR3Q02985 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CFHR3Q02985 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 AL355802.2-201ENST00000402069 882 ntBASIC16.11■□□□□ 0.17
CFHR3Q02985 MIPEPP3-201ENST00000412105 444 ntBASIC16.11■□□□□ 0.17
CFHR3Q02985 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.11■□□□□ 0.17
CFHR3Q02985 AL138781.1-201ENST00000566567 1274 ntBASIC16.11■□□□□ 0.17
CFHR3Q02985 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.11■□□□□ 0.17
CFHR3Q02985 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.11■□□□□ 0.17
CFHR3Q02985 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.11■□□□□ 0.17
CFHR3Q02985 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CFHR3Q02985 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFHR3Q02985 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CFHR3Q02985 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.1■□□□□ 0.17
CFHR3Q02985 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.1■□□□□ 0.17
CFHR3Q02985 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms