Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 AC104187.1-201ENST00000607510 612 ntBASIC19.85■□□□□ 0.77
HMGCS1Q01581 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 RARRES2P11-201ENST00000635158 484 ntBASIC19.85■□□□□ 0.77
HMGCS1Q01581 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCS1Q01581 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCS1Q01581 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCS1Q01581 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HMGCS1Q01581 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCS1Q01581 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.83■□□□□ 0.77
HMGCS1Q01581 AC123595.1-201ENST00000440769 1046 ntBASIC19.83■□□□□ 0.77
HMGCS1Q01581 YBX1P1-201ENST00000445822 960 ntBASIC19.83■□□□□ 0.77
HMGCS1Q01581 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCS1Q01581 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCS1Q01581 SLC7A5P2-201ENST00000553010 536 ntBASIC19.83■□□□□ 0.77
HMGCS1Q01581 TERF1P2-201ENST00000583350 1212 ntBASIC19.83■□□□□ 0.77
HMGCS1Q01581 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCS1Q01581 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCS1Q01581 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
HMGCS1Q01581 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCS1Q01581 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCS1Q01581 KRT16P2-201ENST00000414673 1423 ntBASIC19.83■□□□□ 0.76
HMGCS1Q01581 PCDHAC2-203ENST00000615316 3011 ntBASIC19.83■□□□□ 0.76
HMGCS1Q01581 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCS1Q01581 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HMGCS1Q01581 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCS1Q01581 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCS1Q01581 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 AC020907.5-201ENST00000624372 1936 ntBASIC19.82■□□□□ 0.76
HMGCS1Q01581 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCS1Q01581 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L2-201ENST00000561772 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 CCDC92B-201ENST00000575506 885 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 AP001160.3-201ENST00000601484 763 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L6-201ENST00000626483 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L1-201ENST00000627662 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L8-201ENST00000629013 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L3-201ENST00000630187 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L7-201ENST00000630678 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 DUX4L5-201ENST00000630834 1275 ntBASIC19.81■□□□□ 0.76
HMGCS1Q01581 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HMGCS1Q01581 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms