Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEP78395 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.73■□□□□ 0.91
PRAMEP78395 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEP78395 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PRAMEP78395 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEP78395 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEP78395 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEP78395 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEP78395 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEP78395 NTF6G-201ENST00000591094 616 ntBASIC20.72■□□□□ 0.91
PRAMEP78395 RARRES2P11-201ENST00000635158 484 ntBASIC20.72■□□□□ 0.91
PRAMEP78395 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PRAMEP78395 AC019069.1-201ENST00000610008 1333 ntBASIC20.72■□□□□ 0.91
PRAMEP78395 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEP78395 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEP78395 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEP78395 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEP78395 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEP78395 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PRAMEP78395 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PRAMEP78395 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEP78395 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEP78395 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.71■□□□□ 0.91
PRAMEP78395 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.71■□□□□ 0.91
PRAMEP78395 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.71■□□□□ 0.91
PRAMEP78395 AC087623.3-201ENST00000607047 1098 ntBASIC20.71■□□□□ 0.91
PRAMEP78395 AC011484.1-201ENST00000377652 1995 ntBASIC20.71■□□□□ 0.91
PRAMEP78395 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEP78395 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
PRAMEP78395 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEP78395 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEP78395 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PRAMEP78395 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PRAMEP78395 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEP78395 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEP78395 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEP78395 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEP78395 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEP78395 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEP78395 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 KRT18P61-201ENST00000585825 1298 ntBASIC20.69■□□□□ 0.9
PRAMEP78395 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEP78395 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEP78395 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.69■□□□□ 0.9
PRAMEP78395 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEP78395 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEP78395 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms