Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KRT87P-202ENST00000534226 1464 ntBASIC20.15■□□□□ 0.82
CDH13P55290 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH13P55290 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDH13P55290 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH13P55290 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH13P55290 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH13P55290 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH13P55290 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH13P55290 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CDH13P55290 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CDH13P55290 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDH13P55290 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.14■□□□□ 0.81
CDH13P55290 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH13P55290 AC008175.2-201ENST00000612840 297 ntBASIC20.14■□□□□ 0.81
CDH13P55290 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH13P55290 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH13P55290 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH13P55290 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH13P55290 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH13P55290 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH13P55290 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.13■□□□□ 0.81
CDH13P55290 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDH13P55290 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDH13P55290 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH13P55290 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH13P55290 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH13P55290 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH13P55290 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH13P55290 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH13P55290 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH13P55290 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH13P55290 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 POU5F1P4-201ENST00000413175 1085 ntBASIC20.12■□□□□ 0.81
CDH13P55290 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH13P55290 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH13P55290 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH13P55290 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CDH13P55290 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH13P55290 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDH13P55290 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
CDH13P55290 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDH13P55290 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.11■□□□□ 0.81
CDH13P55290 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH13P55290 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH13P55290 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH13P55290 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 AC112907.3-201ENST00000577781 2400 ntBASIC20.1■□□□□ 0.81
CDH13P55290 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 AC138907.5-202ENST00000569484 235 ntBASIC20.1■□□□□ 0.81
CDH13P55290 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CDH13P55290 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms