Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.16■□□□□ 0.66
PSMD4P55036 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.16■□□□□ 0.66
PSMD4P55036 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.16■□□□□ 0.66
PSMD4P55036 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.15■□□□□ 0.66
PSMD4P55036 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PSMD4P55036 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PSMD4P55036 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.15■□□□□ 0.66
PSMD4P55036 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.15■□□□□ 0.66
PSMD4P55036 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.15■□□□□ 0.66
PSMD4P55036 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.15■□□□□ 0.66
PSMD4P55036 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.15■□□□□ 0.66
PSMD4P55036 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PSMD4P55036 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PSMD4P55036 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PSMD4P55036 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PSMD4P55036 AC121338.2-201ENST00000622535 1744 ntBASIC19.14■□□□□ 0.66
PSMD4P55036 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.66
PSMD4P55036 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
PSMD4P55036 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
PSMD4P55036 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.14■□□□□ 0.65
PSMD4P55036 AL121603.2-201ENST00000557373 2117 ntBASIC19.14■□□□□ 0.65
PSMD4P55036 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.14■□□□□ 0.65
PSMD4P55036 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PSMD4P55036 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.14■□□□□ 0.65
PSMD4P55036 RARRES2P11-201ENST00000635158 484 ntBASIC19.14■□□□□ 0.65
PSMD4P55036 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.14■□□□□ 0.65
PSMD4P55036 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PSMD4P55036 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PSMD4P55036 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.14■□□□□ 0.65
PSMD4P55036 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSMD4P55036 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSMD4P55036 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.13■□□□□ 0.65
PSMD4P55036 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.13■□□□□ 0.65
PSMD4P55036 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
PSMD4P55036 RBM17P2-201ENST00000616397 1405 ntBASIC19.13■□□□□ 0.65
PSMD4P55036 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PSMD4P55036 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
PSMD4P55036 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSMD4P55036 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PSMD4P55036 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PSMD4P55036 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PSMD4P55036 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PSMD4P55036 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSMD4P55036 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSMD4P55036 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
PSMD4P55036 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSMD4P55036 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.12■□□□□ 0.65
PSMD4P55036 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.12■□□□□ 0.65
PSMD4P55036 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PSMD4P55036 AC006015.1-201ENST00000429970 570 ntBASIC19.12■□□□□ 0.65
PSMD4P55036 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.12■□□□□ 0.65
PSMD4P55036 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.12■□□□□ 0.65
PSMD4P55036 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.12■□□□□ 0.65
PSMD4P55036 AC022517.1-201ENST00000592429 346 ntBASIC19.12■□□□□ 0.65
PSMD4P55036 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.12■□□□□ 0.65
PSMD4P55036 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.12■□□□□ 0.65
PSMD4P55036 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PSMD4P55036 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.12■□□□□ 0.65
PSMD4P55036 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PSMD4P55036 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PSMD4P55036 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PSMD4P55036 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.11■□□□□ 0.65
PSMD4P55036 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PSMD4P55036 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.11■□□□□ 0.65
PSMD4P55036 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.11■□□□□ 0.65
PSMD4P55036 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 BID-214ENST00000617586 542 ntTSL 5 BASIC19.11■□□□□ 0.65
PSMD4P55036 AC010536.3-201ENST00000620306 533 ntBASIC19.11■□□□□ 0.65
PSMD4P55036 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PSMD4P55036 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms