Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.36■■□□□ 1.01
PTPN5P54829 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.36■■□□□ 1.01
PTPN5P54829 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PTPN5P54829 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.36■■□□□ 1.01
PTPN5P54829 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PTPN5P54829 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN5P54829 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PTPN5P54829 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN5P54829 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.35■■□□□ 1.01
PTPN5P54829 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
PTPN5P54829 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN5P54829 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN5P54829 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN5P54829 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.35■■□□□ 1.01
PTPN5P54829 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.35■■□□□ 1.01
PTPN5P54829 AC120498.10-201ENST00000621827 505 ntBASIC21.35■■□□□ 1.01
PTPN5P54829 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTPN5P54829 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN5P54829 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN5P54829 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN5P54829 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN5P54829 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN5P54829 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.34■■□□□ 1.01
PTPN5P54829 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 C2orf69P4-201ENST00000565394 541 ntBASIC21.34■■□□□ 1.01
PTPN5P54829 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.34■■□□□ 1.01
PTPN5P54829 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN5P54829 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN5P54829 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PTPN5P54829 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN5P54829 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
PTPN5P54829 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN5P54829 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN5P54829 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.33■■□□□ 1.01
PTPN5P54829 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN5P54829 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN5P54829 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN5P54829 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN5P54829 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN5P54829 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN5P54829 FAM99A-202ENST00000538190 1989 ntBASIC21.33■■□□□ 1.01
PTPN5P54829 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.33■■□□□ 1
PTPN5P54829 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTPN5P54829 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PTPN5P54829 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTPN5P54829 EP400NL-214ENST00000641289 2402 ntBASIC21.33■■□□□ 1
PTPN5P54829 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
PTPN5P54829 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
PTPN5P54829 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.32■■□□□ 1
PTPN5P54829 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.32■■□□□ 1
PTPN5P54829 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.32■■□□□ 1
PTPN5P54829 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 AC069544.1-201ENST00000609399 999 ntBASIC21.32■■□□□ 1
PTPN5P54829 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN5P54829 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.32■■□□□ 1
PTPN5P54829 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.32■■□□□ 1
PTPN5P54829 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.32■■□□□ 1
PTPN5P54829 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.31■■□□□ 1
PTPN5P54829 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
PTPN5P54829 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PTPN5P54829 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 AP006587.3-201ENST00000525742 1516 ntBASIC21.31■■□□□ 1
PTPN5P54829 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
PTPN5P54829 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PTPN5P54829 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PTPN5P54829 AL049637.2-201ENST00000641778 930 ntBASIC21.31■■□□□ 1
PTPN5P54829 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.31■■□□□ 1
PTPN5P54829 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.31■■□□□ 1
PTPN5P54829 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN5P54829 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms