Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.43■□□□□ 0.86
CLNS1AP54105 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.43■□□□□ 0.86
CLNS1AP54105 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLNS1AP54105 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLNS1AP54105 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.42■□□□□ 0.86
CLNS1AP54105 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.42■□□□□ 0.86
CLNS1AP54105 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLNS1AP54105 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
CLNS1AP54105 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLNS1AP54105 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.42■□□□□ 0.86
CLNS1AP54105 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLNS1AP54105 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.41■□□□□ 0.86
CLNS1AP54105 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.41■□□□□ 0.86
CLNS1AP54105 AL034346.1-201ENST00000568244 1277 ntBASIC20.41■□□□□ 0.86
CLNS1AP54105 OXCT2P1-201ENST00000447263 1535 ntBASIC20.41■□□□□ 0.86
CLNS1AP54105 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
CLNS1AP54105 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 AC026471.6-201ENST00000622954 1905 ntBASIC20.41■□□□□ 0.86
CLNS1AP54105 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLNS1AP54105 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLNS1AP54105 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 AC120498.9-201ENST00000339021 3867 ntBASIC20.4■□□□□ 0.86
CLNS1AP54105 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CLNS1AP54105 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.4■□□□□ 0.86
CLNS1AP54105 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLNS1AP54105 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLNS1AP54105 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLNS1AP54105 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 AL138724.1-201ENST00000606771 1088 ntBASIC20.4■□□□□ 0.86
CLNS1AP54105 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.4■□□□□ 0.86
CLNS1AP54105 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLNS1AP54105 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLNS1AP54105 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.4■□□□□ 0.86
CLNS1AP54105 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CLNS1AP54105 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CLNS1AP54105 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLNS1AP54105 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.39■□□□□ 0.86
CLNS1AP54105 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CLNS1AP54105 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.39■□□□□ 0.85
CLNS1AP54105 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.39■□□□□ 0.85
CLNS1AP54105 AL512631.2-201ENST00000604634 923 ntBASIC20.39■□□□□ 0.85
CLNS1AP54105 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.39■□□□□ 0.85
CLNS1AP54105 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLNS1AP54105 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.39■□□□□ 0.85
CLNS1AP54105 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLNS1AP54105 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.38■□□□□ 0.85
CLNS1AP54105 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLNS1AP54105 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.38■□□□□ 0.85
CLNS1AP54105 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.38■□□□□ 0.85
CLNS1AP54105 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLNS1AP54105 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.38■□□□□ 0.85
CLNS1AP54105 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLNS1AP54105 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLNS1AP54105 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.38■□□□□ 0.85
CLNS1AP54105 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLNS1AP54105 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLNS1AP54105 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.37■□□□□ 0.85
CLNS1AP54105 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.37■□□□□ 0.85
CLNS1AP54105 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.37■□□□□ 0.85
CLNS1AP54105 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms