Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR9P51686 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
CCR9P51686 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR9P51686 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR9P51686 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.12■□□□□ 0.49
CCR9P51686 AC027682.1-201ENST00000562846 899 ntBASIC18.12■□□□□ 0.49
CCR9P51686 AC008764.7-201ENST00000593779 1081 ntBASIC18.12■□□□□ 0.49
CCR9P51686 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR9P51686 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.12■□□□□ 0.49
CCR9P51686 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR9P51686 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 TSPY26P-201ENST00000476365 1326 ntBASIC18.12■□□□□ 0.49
CCR9P51686 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR9P51686 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR9P51686 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR9P51686 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.12■□□□□ 0.49
CCR9P51686 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR9P51686 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCR9P51686 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 AC099791.1-201ENST00000416440 715 ntBASIC18.11■□□□□ 0.49
CCR9P51686 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CCR9P51686 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCR9P51686 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.11■□□□□ 0.49
CCR9P51686 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 AP004607.4-201ENST00000530158 1459 ntBASIC18.11■□□□□ 0.49
CCR9P51686 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 AL162377.1-201ENST00000618844 1793 ntBASIC18.11■□□□□ 0.49
CCR9P51686 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.11■□□□□ 0.49
CCR9P51686 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.11■□□□□ 0.49
CCR9P51686 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCR9P51686 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.1■□□□□ 0.49
CCR9P51686 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.1■□□□□ 0.49
CCR9P51686 MIR572-201ENST00000384983 95 ntBASIC18.1■□□□□ 0.49
CCR9P51686 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.1■□□□□ 0.49
CCR9P51686 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.1■□□□□ 0.49
CCR9P51686 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.1■□□□□ 0.49
CCR9P51686 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.1■□□□□ 0.49
CCR9P51686 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.1■□□□□ 0.49
CCR9P51686 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
CCR9P51686 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCR9P51686 FP700111.2-201ENST00000619190 1892 ntBASIC18.09■□□□□ 0.49
CCR9P51686 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.09■□□□□ 0.49
CCR9P51686 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.09■□□□□ 0.49
CCR9P51686 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.09■□□□□ 0.49
CCR9P51686 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.09■□□□□ 0.49
CCR9P51686 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.09■□□□□ 0.49
CCR9P51686 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.09■□□□□ 0.49
CCR9P51686 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCR9P51686 PCDHAC2-203ENST00000615316 3011 ntBASIC18.09■□□□□ 0.49
CCR9P51686 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.08■□□□□ 0.49
CCR9P51686 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCR9P51686 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.08■□□□□ 0.49
CCR9P51686 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.08■□□□□ 0.49
CCR9P51686 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCR9P51686 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
CCR9P51686 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms