Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1P51610 LINC01023-201ENST00000606054 436 ntBASIC18.08■□□□□ 0.48
HCFC1P51610 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.08■□□□□ 0.48
HCFC1P51610 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.08■□□□□ 0.48
HCFC1P51610 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 AC127496.7-201ENST00000625110 1798 ntBASIC18.07■□□□□ 0.48
HCFC1P51610 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC1P51610 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1P51610 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC1P51610 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1P51610 FAM99A-202ENST00000538190 1989 ntBASIC18.07■□□□□ 0.48
HCFC1P51610 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HCFC1P51610 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC1P51610 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC1P51610 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC1P51610 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 KRT18P68-201ENST00000392293 1000 ntBASIC18.06■□□□□ 0.48
HCFC1P51610 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.06■□□□□ 0.48
HCFC1P51610 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HCFC1P51610 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HCFC1P51610 AL355075.4-201ENST00000554988 638 ntBASIC18.06■□□□□ 0.48
HCFC1P51610 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC1P51610 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC1P51610 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 SNORA78-201ENST00000459373 127 ntBASIC18.05■□□□□ 0.48
HCFC1P51610 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC1P51610 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC1P51610 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
HCFC1P51610 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC1P51610 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HCFC1P51610 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC1P51610 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC1P51610 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.04■□□□□ 0.48
HCFC1P51610 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HCFC1P51610 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.04■□□□□ 0.48
HCFC1P51610 Z99916.2-201ENST00000604037 246 ntBASIC18.04■□□□□ 0.48
HCFC1P51610 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
HCFC1P51610 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC1P51610 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC1P51610 AC092053.2-201ENST00000640557 1818 ntBASIC18.04■□□□□ 0.48
HCFC1P51610 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC1P51610 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
HCFC1P51610 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC1P51610 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
HCFC1P51610 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC1P51610 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.03■□□□□ 0.48
HCFC1P51610 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HCFC1P51610 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.03■□□□□ 0.48
HCFC1P51610 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HCFC1P51610 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC1P51610 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC1P51610 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC1P51610 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms