Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.95■□□□□ 0.78
RAB28P51157 AC121338.2-201ENST00000622535 1744 ntBASIC19.95■□□□□ 0.78
RAB28P51157 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.95■□□□□ 0.78
RAB28P51157 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RAB28P51157 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAB28P51157 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RAB28P51157 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB28P51157 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB28P51157 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB28P51157 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RAB28P51157 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB28P51157 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB28P51157 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAB28P51157 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB28P51157 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 AC093787.1-201ENST00000450396 207 ntBASIC19.93■□□□□ 0.78
RAB28P51157 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.93■□□□□ 0.78
RAB28P51157 AC100791.3-201ENST00000617619 330 ntBASIC19.93■□□□□ 0.78
RAB28P51157 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB28P51157 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB28P51157 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RAB28P51157 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB28P51157 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB28P51157 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB28P51157 ID1-201ENST00000376105 1233 ntBASIC19.92■□□□□ 0.78
RAB28P51157 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB28P51157 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB28P51157 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB28P51157 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB28P51157 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB28P51157 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB28P51157 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB28P51157 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RAB28P51157 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.91■□□□□ 0.78
RAB28P51157 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB28P51157 AL109923.1-201ENST00000618799 583 ntBASIC19.91■□□□□ 0.78
RAB28P51157 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RAB28P51157 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
RAB28P51157 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB28P51157 AC010980.2-201ENST00000587099 1412 ntBASIC19.91■□□□□ 0.78
RAB28P51157 MKRN4P-201ENST00000444706 1521 ntBASIC19.91■□□□□ 0.78
RAB28P51157 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB28P51157 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB28P51157 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB28P51157 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB28P51157 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB28P51157 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB28P51157 TSPY6P-201ENST00000448518 926 ntBASIC19.9■□□□□ 0.78
RAB28P51157 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.9■□□□□ 0.78
RAB28P51157 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB28P51157 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB28P51157 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB28P51157 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB28P51157 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB28P51157 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB28P51157 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB28P51157 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms