Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.25■□□□□ 0.67
CLK1P49759 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.25■□□□□ 0.67
CLK1P49759 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK1P49759 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLK1P49759 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK1P49759 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK1P49759 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLK1P49759 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.24■□□□□ 0.67
CLK1P49759 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK1P49759 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK1P49759 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.24■□□□□ 0.67
CLK1P49759 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK1P49759 TPRG1LP1-201ENST00000598702 760 ntBASIC19.24■□□□□ 0.67
CLK1P49759 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.24■□□□□ 0.67
CLK1P49759 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK1P49759 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK1P49759 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK1P49759 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK1P49759 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
CLK1P49759 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLK1P49759 AC055733.4-201ENST00000638462 1354 ntBASIC19.23■□□□□ 0.67
CLK1P49759 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLK1P49759 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLK1P49759 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.23■□□□□ 0.67
CLK1P49759 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLK1P49759 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK1P49759 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLK1P49759 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLK1P49759 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.22■□□□□ 0.67
CLK1P49759 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.22■□□□□ 0.67
CLK1P49759 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 AC104564.3-201ENST00000582367 638 ntBASIC19.22■□□□□ 0.67
CLK1P49759 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK1P49759 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.22■□□□□ 0.67
CLK1P49759 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK1P49759 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 LINC02228-203ENST00000641970 1355 ntBASIC19.21■□□□□ 0.67
CLK1P49759 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
CLK1P49759 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLK1P49759 MIR6084-201ENST00000622012 110 ntBASIC19.21■□□□□ 0.67
CLK1P49759 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
CLK1P49759 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK1P49759 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.21■□□□□ 0.66
CLK1P49759 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CLK1P49759 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.2■□□□□ 0.66
CLK1P49759 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms