Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1EP49674 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.31■□□□□ 0.84
CSNK1EP49674 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.31■□□□□ 0.84
CSNK1EP49674 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1EP49674 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1EP49674 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1EP49674 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1EP49674 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CSNK1EP49674 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.3■□□□□ 0.84
CSNK1EP49674 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.3■□□□□ 0.84
CSNK1EP49674 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.3■□□□□ 0.84
CSNK1EP49674 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1EP49674 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSNK1EP49674 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CSNK1EP49674 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1EP49674 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.29■□□□□ 0.84
CSNK1EP49674 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CSNK1EP49674 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1EP49674 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1EP49674 SNORA78-201ENST00000459373 127 ntBASIC20.29■□□□□ 0.84
CSNK1EP49674 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1EP49674 C2orf69P4-201ENST00000565394 541 ntBASIC20.29■□□□□ 0.84
CSNK1EP49674 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1EP49674 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1EP49674 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CSNK1EP49674 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1EP49674 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CSNK1EP49674 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CSNK1EP49674 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.28■□□□□ 0.84
CSNK1EP49674 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.28■□□□□ 0.84
CSNK1EP49674 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
CSNK1EP49674 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.28■□□□□ 0.84
CSNK1EP49674 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1EP49674 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1EP49674 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1EP49674 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1EP49674 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1EP49674 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1EP49674 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1EP49674 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CSNK1EP49674 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1EP49674 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CSNK1EP49674 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1EP49674 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSNK1EP49674 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1EP49674 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
CSNK1EP49674 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
CSNK1EP49674 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1EP49674 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1EP49674 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1EP49674 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.26■□□□□ 0.83
CSNK1EP49674 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1EP49674 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1EP49674 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.26■□□□□ 0.83
CSNK1EP49674 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1EP49674 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1EP49674 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1EP49674 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1EP49674 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1EP49674 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms