Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT6CP48668 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT6CP48668 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
KRT6CP48668 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 AC245052.3-201ENST00000450182 901 ntBASIC19.94■□□□□ 0.78
KRT6CP48668 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6CP48668 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6CP48668 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT6CP48668 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6CP48668 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT6CP48668 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT6CP48668 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KRT6CP48668 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L2-201ENST00000561772 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L6-201ENST00000626483 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L1-201ENST00000627662 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L8-201ENST00000629013 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L3-201ENST00000630187 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L7-201ENST00000630678 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 DUX4L5-201ENST00000630834 1275 ntBASIC19.93■□□□□ 0.78
KRT6CP48668 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KRT6CP48668 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT6CP48668 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
KRT6CP48668 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRT6CP48668 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6CP48668 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 YBX1P1-201ENST00000445822 960 ntBASIC19.92■□□□□ 0.78
KRT6CP48668 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.92■□□□□ 0.78
KRT6CP48668 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT6CP48668 AC073314.1-201ENST00000568729 2216 ntBASIC19.92■□□□□ 0.78
KRT6CP48668 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
KRT6CP48668 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT6CP48668 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KRT6CP48668 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6CP48668 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT6CP48668 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6CP48668 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6CP48668 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6CP48668 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6CP48668 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6CP48668 AC104187.1-201ENST00000607510 612 ntBASIC19.91■□□□□ 0.78
KRT6CP48668 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6CP48668 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT6CP48668 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6CP48668 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6CP48668 FP700111.2-201ENST00000619190 1892 ntBASIC19.9■□□□□ 0.78
KRT6CP48668 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT6CP48668 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT6CP48668 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT6CP48668 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms