Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX2P48431 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.12■□□□□ 0.49
SOX2P48431 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOX2P48431 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.12■□□□□ 0.49
SOX2P48431 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX2P48431 AC055733.4-201ENST00000638462 1354 ntBASIC18.11■□□□□ 0.49
SOX2P48431 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SOX2P48431 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX2P48431 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX2P48431 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SOX2P48431 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SOX2P48431 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX2P48431 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX2P48431 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX2P48431 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX2P48431 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX2P48431 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.09■□□□□ 0.49
SOX2P48431 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX2P48431 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.09■□□□□ 0.49
SOX2P48431 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.09■□□□□ 0.49
SOX2P48431 AL136116.3-201ENST00000402907 1138 ntBASIC18.09■□□□□ 0.49
SOX2P48431 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.09■□□□□ 0.49
SOX2P48431 AC233992.3-201ENST00000607491 485 ntBASIC18.09■□□□□ 0.49
SOX2P48431 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.09■□□□□ 0.49
SOX2P48431 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX2P48431 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX2P48431 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX2P48431 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.09■□□□□ 0.49
SOX2P48431 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX2P48431 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX2P48431 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX2P48431 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.08■□□□□ 0.49
SOX2P48431 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.08■□□□□ 0.48
SOX2P48431 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SOX2P48431 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX2P48431 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 AL512408.1-201ENST00000569378 2000 ntBASIC18.08■□□□□ 0.48
SOX2P48431 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX2P48431 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SOX2P48431 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.07■□□□□ 0.48
SOX2P48431 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.07■□□□□ 0.48
SOX2P48431 UNC93B3-201ENST00000308076 687 ntBASIC18.07■□□□□ 0.48
SOX2P48431 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.07■□□□□ 0.48
SOX2P48431 IGHV3-19-201ENST00000521488 291 ntBASIC18.07■□□□□ 0.48
SOX2P48431 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.07■□□□□ 0.48
SOX2P48431 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SOX2P48431 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SOX2P48431 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.07■□□□□ 0.48
SOX2P48431 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SOX2P48431 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SOX2P48431 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX2P48431 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX2P48431 AC005224.4-201ENST00000583262 1652 ntBASIC18.06■□□□□ 0.48
SOX2P48431 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX2P48431 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX2P48431 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SOX2P48431 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX2P48431 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX2P48431 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX2P48431 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms