Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YEF3YLR249W 3135 nt2.56□□□□□ -2
SSN8P47821 UBP15YMR304W 3693 nt2.56□□□□□ -2
SSN8P47821 YGR045CYGR045C 363 nt2.56□□□□□ -2
SSN8P47821 YHL005CYHL005C 393 nt2.56□□□□□ -2
SSN8P47821 YMR013C-AYMR013C-A 150 nt2.56□□□□□ -2
SSN8P47821 YMR144WYMR144W 1029 nt2.56□□□□□ -2
SSN8P47821 YPR096CYPR096C 303 nt2.56□□□□□ -2
SSN8P47821 GCD10YNL062C 1437 nt2.56□□□□□ -2
SSN8P47821 YGR067CYGR067C 2415 nt2.56□□□□□ -2
SSN8P47821 PSD2YGR170W 3417 nt2.55□□□□□ -2
SSN8P47821 RSR1YGR152C 819 nt2.55□□□□□ -2
SSN8P47821 TCD1YHR003C 1290 nt2.55□□□□□ -2
SSN8P47821 BIT61YJL058C 1632 nt2.55□□□□□ -2
SSN8P47821 ALY1YKR021W 2748 nt2.55□□□□□ -2
SSN8P47821 YKR078WYKR078W 1758 nt2.55□□□□□ -2
SSN8P47821 YKU80YMR106C 1890 nt2.55□□□□□ -2
SSN8P47821 RUF22RUF22 515 nt2.55□□□□□ -2
SSN8P47821 YOR032W-AYOR032W-A 201 nt2.55□□□□□ -2
SSN8P47821 YOR073W-AYOR073W-A 234 nt2.55□□□□□ -2
SSN8P47821 RGL1YPL066W 1440 nt2.55□□□□□ -2
SSN8P47821 SEN54YPL083C 1404 nt2.55□□□□□ -2
SSN8P47821 BOI1YBL085W 2943 nt2.55□□□□□ -2
SSN8P47821 PAM1YDR251W 2493 nt2.54□□□□□ -2
SSN8P47821 YEL1YBL060W 2064 nt2.54□□□□□ -2
SSN8P47821 HEH2YDR458C 1992 nt2.54□□□□□ -2
SSN8P47821 RRI2YOL117W 1938 nt2.54□□□□□ -2
SSN8P47821 YOR296WYOR296W 3870 nt2.54□□□□□ -2
SSN8P47821 YDL009CYDL009C 324 nt2.54□□□□□ -2
SSN8P47821 YDR090CYDR090C 933 nt2.54□□□□□ -2
SSN8P47821 CHZ1YER030W 462 nt2.54□□□□□ -2
SSN8P47821 YER079C-AYER079C-A 339 nt2.54□□□□□ -2
SSN8P47821 YIL054WYIL054W 318 nt2.54□□□□□ -2
SSN8P47821 MRP49YKL167C 414 nt2.54□□□□□ -2
SSN8P47821 YLR252WYLR252W 306 nt2.54□□□□□ -2
SSN8P47821 BER1YLR412W 825 nt2.54□□□□□ -2
SSN8P47821 RPL6AYML073C 531 nt2.54□□□□□ -2
SSN8P47821 YNL122CYNL122C 348 nt2.54□□□□□ -2
SSN8P47821 KTI11YBL071W-A 249 nt2.54□□□□□ -2
SSN8P47821 YNL179CYNL179C 438 nt2.54□□□□□ -2
SSN8P47821 SFM1YOR021C 642 nt2.54□□□□□ -2
SSN8P47821 PET123YOR158W 957 nt2.54□□□□□ -2
SSN8P47821 ATP3YBR039W 936 nt2.54□□□□□ -2
SSN8P47821 YRR1YOR162C 2433 nt2.54□□□□□ -2
SSN8P47821 FAA2YER015W 2235 nt2.54□□□□□ -2
SSN8P47821 SMY2YBR172C 2223 nt2.54□□□□□ -2
SSN8P47821 TRZ1YKR079C 2517 nt2.53□□□□□ -2
SSN8P47821 PHO2YDL106C 1680 nt2.53□□□□□ -2
SSN8P47821 YOL057WYOL057W 2136 nt2.53□□□□□ -2
SSN8P47821 VAR1Q0140 1197 nt2.53□□□□□ -2
SSN8P47821 RPS22AYJL190C 393 nt2.53□□□□□ -2
SSN8P47821 RRT16YNL105W 429 nt2.53□□□□□ -2
SSN8P47821 SWM2YNR004W 441 nt2.53□□□□□ -2
SSN8P47821 PHO80YOL001W 882 nt2.53□□□□□ -2
SSN8P47821 TOP2YNL088W 4287 nt2.53□□□□□ -2.01
SSN8P47821 MXR1YER042W 555 nt2.52□□□□□ -2.01
SSN8P47821 RRT13YER066W 558 nt2.52□□□□□ -2.01
SSN8P47821 YHL006W-AYHL006W-A 354 nt2.52□□□□□ -2.01
SSN8P47821 DFG10YIL049W 762 nt2.52□□□□□ -2.01
SSN8P47821 EAF6YJR082C 342 nt2.52□□□□□ -2.01
SSN8P47821 YJR157WYJR157W 363 nt2.52□□□□□ -2.01
SSN8P47821 SDO1YLR022C 753 nt2.52□□□□□ -2.01
SSN8P47821 YLR302CYLR302C 363 nt2.52□□□□□ -2.01
SSN8P47821 YOR385WYOR385W 873 nt2.52□□□□□ -2.01
SSN8P47821 snR191snR191 274 nt2.52□□□□□ -2.01
SSN8P47821 TFB1YDR311W 1929 nt2.52□□□□□ -2.01
SSN8P47821 SIR3YLR442C 2937 nt2.52□□□□□ -2.01
SSN8P47821 YKL222CYKL222C 2118 nt2.51□□□□□ -2.01
SSN8P47821 RVS161YCR009C 798 nt2.51□□□□□ -2.01
SSN8P47821 PPH3YDR075W 927 nt2.51□□□□□ -2.01
SSN8P47821 VPS51YKR020W 495 nt2.51□□□□□ -2.01
SSN8P47821 RPL19BYBL027W 570 nt2.51□□□□□ -2.01
SSN8P47821 RIM9YMR063W 720 nt2.51□□□□□ -2.01
SSN8P47821 AIM36YMR157C 768 nt2.51□□□□□ -2.01
SSN8P47821 RIF1YBR275C 5751 nt2.5□□□□□ -2.01
SSN8P47821 ORC2YBR060C 1863 nt2.5□□□□□ -2.01
SSN8P47821 AI2Q0055 2565 nt2.5□□□□□ -2.01
SSN8P47821 TIM11YDR322C-A 291 nt2.5□□□□□ -2.01
SSN8P47821 ERG28YER044C 447 nt2.5□□□□□ -2.01
SSN8P47821 YGR107WYGR107W 450 nt2.5□□□□□ -2.01
SSN8P47821 FYV4YHR059W 393 nt2.5□□□□□ -2.01
SSN8P47821 YKL044WYKL044W 321 nt2.5□□□□□ -2.01
SSN8P47821 YLR222C-AYLR222C-A 231 nt2.5□□□□□ -2.01
SSN8P47821 ILV5YLR355C 1188 nt2.5□□□□□ -2.01
SSN8P47821 LSM2YBL026W 288 nt2.5□□□□□ -2.01
SSN8P47821 RRG8YPR116W 834 nt2.5□□□□□ -2.01
SSN8P47821 TLC1TLC1 1301 nt2.49□□□□□ -2.01
SSN8P47821 TRA1YHR099W 11235 nt2.49□□□□□ -2.01
SSN8P47821 YDR220CYDR220C 294 nt2.49□□□□□ -2.01
SSN8P47821 tF(GAA)DtF(GAA)D 73 nt2.49□□□□□ -2.01
SSN8P47821 tF(GAA)NtF(GAA)N 73 nt2.49□□□□□ -2.01
SSN8P47821 RPS26BYER131W 360 nt2.49□□□□□ -2.01
SSN8P47821 YAL037WYAL037W 804 nt2.49□□□□□ -2.01
SSN8P47821 APC9YLR102C 798 nt2.49□□□□□ -2.01
SSN8P47821 HHT2YNL031C 411 nt2.49□□□□□ -2.01
SSN8P47821 HSP10YOR020C 321 nt2.49□□□□□ -2.01
SSN8P47821 YPL034WYPL034W 498 nt2.49□□□□□ -2.01
SSN8P47821 ARR2YPR200C 393 nt2.49□□□□□ -2.01
SSN8P47821 ROG1YGL144C 2058 nt2.49□□□□□ -2.01
SSN8P47821 BFR1YOR198C 1413 nt2.49□□□□□ -2.01
SSN8P47821 SNF12YNR023W 1701 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms