Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YPR014CYPR014C 330 nt1.12□□□□□ -2.23
VPS55P47111 MRPL27YBR282W 441 nt1.12□□□□□ -2.23
VPS55P47111 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
VPS55P47111 TRL1YJL087C 2484 nt1.11□□□□□ -2.23
VPS55P47111 NIC96YFR002W 2520 nt1.11□□□□□ -2.23
VPS55P47111 YMR31YFR049W 372 nt1.11□□□□□ -2.23
VPS55P47111 YGR219WYGR219W 342 nt1.11□□□□□ -2.23
VPS55P47111 CKA1YIL035C 1119 nt1.11□□□□□ -2.23
VPS55P47111 YNL234WYNL234W 1281 nt1.11□□□□□ -2.23
VPS55P47111 YBR277CYBR277C 402 nt1.11□□□□□ -2.23
VPS55P47111 SYO1YDL063C 1863 nt1.11□□□□□ -2.23
VPS55P47111 MUB1YMR100W 1863 nt1.11□□□□□ -2.23
VPS55P47111 MDM20YOL076W 2391 nt1.11□□□□□ -2.23
VPS55P47111 SPC72YAL047C 1869 nt1.1□□□□□ -2.23
VPS55P47111 UPF3YGR072W 1164 nt1.1□□□□□ -2.23
VPS55P47111 SEC28YIL076W 891 nt1.1□□□□□ -2.23
VPS55P47111 SEN15YMR059W 387 nt1.1□□□□□ -2.23
VPS55P47111 AIM41YOR215C 558 nt1.1□□□□□ -2.23
VPS55P47111 YPL039WYPL039W 951 nt1.1□□□□□ -2.23
VPS55P47111 YBR201C-AYBR201C-A 204 nt1.1□□□□□ -2.23
VPS55P47111 HKR1YDR420W 5409 nt1.1□□□□□ -2.23
VPS55P47111 HOP1YIL072W 1818 nt1.1□□□□□ -2.23
VPS55P47111 SAS4YDR181C 1446 nt1.09□□□□□ -2.23
VPS55P47111 YHL045WYHL045W 348 nt1.09□□□□□ -2.23
VPS55P47111 YIL089WYIL089W 618 nt1.09□□□□□ -2.23
VPS55P47111 YIL161WYIL161W 708 nt1.09□□□□□ -2.23
VPS55P47111 NCE101YJL205C 162 nt1.09□□□□□ -2.23
VPS55P47111 RPA12YJR063W 378 nt1.09□□□□□ -2.23
VPS55P47111 YPR145C-AYPR145C-A 237 nt1.09□□□□□ -2.23
VPS55P47111 YBR287WYBR287W 1284 nt1.09□□□□□ -2.23
VPS55P47111 YBR292CYBR292C 372 nt1.09□□□□□ -2.23
VPS55P47111 FUS1YCL027W 1539 nt1.09□□□□□ -2.24
VPS55P47111 PHR1YOR386W 1698 nt1.08□□□□□ -2.24
VPS55P47111 SPC98YNL126W 2541 nt1.08□□□□□ -2.24
VPS55P47111 snR83snR83 306 nt1.08□□□□□ -2.24
VPS55P47111 YDL186WYDL186W 834 nt1.08□□□□□ -2.24
VPS55P47111 YHL044WYHL044W 708 nt1.08□□□□□ -2.24
VPS55P47111 ATG10YLL042C 504 nt1.08□□□□□ -2.24
VPS55P47111 NGL1YOL042W 1092 nt1.08□□□□□ -2.24
VPS55P47111 HEM4YOR278W 828 nt1.08□□□□□ -2.24
VPS55P47111 PRM4YPL156C 855 nt1.08□□□□□ -2.24
VPS55P47111 snR191snR191 274 nt1.08□□□□□ -2.24
VPS55P47111 YJR061WYJR061W 2808 nt1.08□□□□□ -2.24
VPS55P47111 MET18YIL128W 3099 nt1.08□□□□□ -2.24
VPS55P47111 CET1YPL228W 1650 nt1.07□□□□□ -2.24
VPS55P47111 AHC1YOR023C 1701 nt1.07□□□□□ -2.24
VPS55P47111 PRP6YBR055C 2700 nt1.07□□□□□ -2.24
VPS55P47111 YDL041WYDL041W 354 nt1.07□□□□□ -2.24
VPS55P47111 SHR3YDL212W 633 nt1.07□□□□□ -2.24
VPS55P47111 UBC5YDR059C 447 nt1.07□□□□□ -2.24
VPS55P47111 YMR144WYMR144W 1029 nt1.07□□□□□ -2.24
VPS55P47111 FIG1YBR040W 897 nt1.07□□□□□ -2.24
VPS55P47111 SOK2YMR016C 2358 nt1.07□□□□□ -2.24
VPS55P47111 SPC110YDR356W 2835 nt1.07□□□□□ -2.24
VPS55P47111 RLF2YPR018W 1821 nt1.06□□□□□ -2.24
VPS55P47111 AI3Q0060 1248 nt1.06□□□□□ -2.24
VPS55P47111 DPP1YDR284C 870 nt1.06□□□□□ -2.24
VPS55P47111 GPI19YDR437W 423 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)E1tH(GUG)E1 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)E2tH(GUG)E2 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)G1tH(GUG)G1 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)G2tH(GUG)G2 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)HtH(GUG)H 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)KtH(GUG)K 72 nt1.06□□□□□ -2.24
VPS55P47111 tH(GUG)MtH(GUG)M 72 nt1.06□□□□□ -2.24
VPS55P47111 YER107W-AYER107W-A 321 nt1.06□□□□□ -2.24
VPS55P47111 ERG29YMR134W 714 nt1.06□□□□□ -2.24
VPS55P47111 YMR230W-AYMR230W-A 189 nt1.06□□□□□ -2.24
VPS55P47111 CCL1YPR025C 1182 nt1.06□□□□□ -2.24
VPS55P47111 SRP1YNL189W 1629 nt1.06□□□□□ -2.24
VPS55P47111 YDR131CYDR131C 1671 nt1.06□□□□□ -2.24
VPS55P47111 CDC25YLR310C 4770 nt1.06□□□□□ -2.24
VPS55P47111 SSF1YHR066W 1362 nt1.06□□□□□ -2.24
VPS55P47111 PDS5YMR076C 3834 nt1.06□□□□□ -2.24
VPS55P47111 RAD18YCR066W 1464 nt1.05□□□□□ -2.24
VPS55P47111 PBY1YBR094W 2262 nt1.05□□□□□ -2.24
VPS55P47111 YCR108CYCR108C 192 nt1.05□□□□□ -2.24
VPS55P47111 YDR018CYDR018C 1191 nt1.05□□□□□ -2.24
VPS55P47111 NRG1YDR043C 696 nt1.05□□□□□ -2.24
VPS55P47111 YGR109W-AYGR109W-A 873 nt1.05□□□□□ -2.24
VPS55P47111 ALB1YJL122W 528 nt1.05□□□□□ -2.24
VPS55P47111 YJL133C-AYJL133C-A 225 nt1.05□□□□□ -2.24
VPS55P47111 BET5YML077W 480 nt1.05□□□□□ -2.24
VPS55P47111 CTL1YMR180C 963 nt1.05□□□□□ -2.24
VPS55P47111 YBL094CYBL094C 333 nt1.05□□□□□ -2.24
VPS55P47111 YNR034W-AYNR034W-A 297 nt1.05□□□□□ -2.24
VPS55P47111 ATG5YPL149W 885 nt1.05□□□□□ -2.24
VPS55P47111 TAZ1YPR140W 1146 nt1.05□□□□□ -2.24
VPS55P47111 TFC8YPL007C 1767 nt1.05□□□□□ -2.24
VPS55P47111 YJR039WYJR039W 3366 nt1.05□□□□□ -2.24
VPS55P47111 GPI17YDR434W 1605 nt1.04□□□□□ -2.24
VPS55P47111 PAU3YCR104W 375 nt1.04□□□□□ -2.24
VPS55P47111 RPL37BYDR500C 267 nt1.04□□□□□ -2.24
VPS55P47111 YIL012WYIL012W 342 nt1.04□□□□□ -2.24
VPS55P47111 YLR169WYLR169W 354 nt1.04□□□□□ -2.24
VPS55P47111 YIP3YNL044W 531 nt1.04□□□□□ -2.24
VPS55P47111 HRT1YOL133W 366 nt1.04□□□□□ -2.24
VPS55P47111 PEP12YOR036W 867 nt1.04□□□□□ -2.24
VPS55P47111 YPR089WYPR089W 2667 nt1.04□□□□□ -2.24
VPS55P47111 DAL5YJR152W 1632 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms