Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 NKTR-204ENST00000445842 560 ntTSL 525.59■■□□□ 1.693e-6■■■■□ 22.9
MATR3P43243 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.08■■□□□ 1.613e-6■■■■□ 22.9
MATR3P43243 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.92■■□□□ 1.583e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.69■■□□□ 1.383e-6■■■■□ 22.9
MATR3P43243 PCM1-210ENST00000518936 710 ntTSL 323.36■■□□□ 1.334e-7■■■■□ 22.9
MATR3P43243 CCDC91-219ENST00000544780 693 ntTSL 322.71■■□□□ 1.232e-6■■■■□ 22.9
MATR3P43243 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.62■■□□□ 1.213e-6■■■■□ 22.9
MATR3P43243 EPS15L1-213ENST00000599790 1921 ntTSL 522.45■■□□□ 1.183e-6■■■■□ 22.9
MATR3P43243 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.2■■□□□ 1.142e-6■■■■□ 22.9
MATR3P43243 ARSG-206ENST00000581639 715 ntTSL 221.98■■□□□ 1.113e-6■■■■□ 22.9
MATR3P43243 MPP6-205ENST00000430180 1191 ntTSL 520.98■□□□□ 0.953e-6■■■■□ 22.9
MATR3P43243 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.923e-6■■■■□ 22.9
MATR3P43243 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.67■□□□□ 0.93e-6■■■■□ 22.9
MATR3P43243 RNF103-CHMP3-201ENST00000440757 805 ntTSL 320.55■□□□□ 0.883e-6■■■■□ 22.9
MATR3P43243 CCDC91-205ENST00000536442 1301 ntTSL 520.54■□□□□ 0.882e-6■■■■□ 22.9
MATR3P43243 CCDC91-218ENST00000544649 665 ntTSL 320.54■□□□□ 0.882e-6■■■■□ 22.9
MATR3P43243 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.822e-6■■■■□ 22.9
MATR3P43243 EXOC5-206ENST00000555148 2349 ntTSL 220.17■□□□□ 0.823e-6■■■■□ 22.9
MATR3P43243 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.741e-6■■■■□ 22.9
MATR3P43243 AKAP13-211ENST00000559362 5459 ntTSL 219.54■□□□□ 0.724e-6■■■■□ 22.9
MATR3P43243 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.723e-6■■■■□ 22.9
MATR3P43243 MYO1E-204ENST00000558646 578 ntTSL 219.51■□□□□ 0.713e-6■■■■□ 22.9
MATR3P43243 KPNA5-203ENST00000413340 689 ntTSL 319.51■□□□□ 0.713e-6■■■■□ 22.9
MATR3P43243 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.42■□□□□ 0.73e-6■■■■□ 22.9
MATR3P43243 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.29■□□□□ 0.683e-6■■■■□ 22.9
MATR3P43243 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.653e-6■■■■□ 22.9
MATR3P43243 NKTR-214ENST00000478488 698 ntTSL 318.94■□□□□ 0.623e-6■■■■□ 22.9
MATR3P43243 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.623e-6■■■■□ 22.9
MATR3P43243 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.543e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.483e-6■■■■□ 22.9
MATR3P43243 CDK8-205ENST00000536792 3032 ntTSL 1 (best)18.06■□□□□ 0.483e-6■■■■□ 22.9
MATR3P43243 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.483e-6■■■■□ 22.9
MATR3P43243 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18■□□□□ 0.474e-7■■■■□ 22.9
MATR3P43243 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.68■□□□□ 0.423e-6■■■■□ 22.9
MATR3P43243 PPP1R12C-204ENST00000586992 4141 nt17.59■□□□□ 0.413e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.56■□□□□ 0.43e-6■■■■□ 22.9
MATR3P43243 NKTR-215ENST00000487466 2335 ntTSL 217.46■□□□□ 0.383e-6■■■■□ 22.9
MATR3P43243 PRMT5-214ENST00000553915 1931 ntTSL 217.34■□□□□ 0.373e-6■■■■□ 22.9
MATR3P43243 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.313e-6■■■■□ 22.9
MATR3P43243 PCM1-204ENST00000517730 2536 ntTSL 1 (best)16.91■□□□□ 0.34e-7■■■■□ 22.9
MATR3P43243 MAP4-212ENST00000468075 487 ntTSL 516.88■□□□□ 0.293e-6■■■■□ 22.9
MATR3P43243 ASCC3-205ENST00000468245 1227 ntTSL 216.85■□□□□ 0.293e-6■■■■□ 22.9
MATR3P43243 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.263e-6■■■■□ 22.9
MATR3P43243 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.253e-6■■■■□ 22.9
MATR3P43243 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.5■□□□□ 0.232e-8■■■■□ 22.9
MATR3P43243 PCM1-218ENST00000523055 1426 ntTSL 1 (best)16.45■□□□□ 0.224e-7■■■■□ 22.9
MATR3P43243 ASCC3-202ENST00000324723 852 ntTSL 316.45■□□□□ 0.223e-6■■■■□ 22.9
MATR3P43243 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.24■□□□□ 0.193e-6■■■■□ 22.9
MATR3P43243 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.198e-12■■■■□ 22.9
MATR3P43243 RNF123-210ENST00000487805 5882 ntTSL 215.84■□□□□ 0.132e-8■■■■□ 22.9
MATR3P43243 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.73■□□□□ 0.113e-6■■■■□ 22.9
MATR3P43243 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.083e-6■■■■□ 22.9
MATR3P43243 OSBPL3-210ENST00000415952 568 ntTSL 415.43■□□□□ 0.063e-6■■■■□ 22.9
MATR3P43243 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.033e-6■■■■□ 22.9
MATR3P43243 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.033e-6■■■■□ 22.9
MATR3P43243 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.77□□□□□ -0.043e-6■■■■□ 22.9
MATR3P43243 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.74□□□□□ -0.053e-6■■■■□ 22.9
MATR3P43243 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.053e-6■■■■□ 22.9
MATR3P43243 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC14.68□□□□□ -0.063e-6■■■■□ 22.9
MATR3P43243 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.65□□□□□ -0.061e-9■■■■□ 22.9
MATR3P43243 GPALPP1-205ENST00000479068 466 ntTSL 214.53□□□□□ -0.083e-6■■■■□ 22.9
MATR3P43243 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC14.51□□□□□ -0.093e-6■■■■□ 22.9
MATR3P43243 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC14.49□□□□□ -0.093e-6■■■■□ 22.9
MATR3P43243 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC14.42□□□□□ -0.13e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-217ENST00000630589 895 ntTSL 514.21□□□□□ -0.133e-6■■■■□ 22.9
MATR3P43243 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.154e-6■■■■□ 22.9
MATR3P43243 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.193e-6■■■■□ 22.9
MATR3P43243 CEP170-220ENST00000522191 561 ntTSL 513.67□□□□□ -0.223e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.5□□□□□ -0.253e-6■■■■□ 22.9
MATR3P43243 RNF123-209ENST00000486102 4564 ntTSL 1 (best)13.46□□□□□ -0.252e-8■■■■□ 22.9
MATR3P43243 PRRC2C-208ENST00000476522 1931 ntTSL 513.45□□□□□ -0.262e-6■■■■□ 22.9
MATR3P43243 BABAM2-207ENST00000436924 874 ntTSL 313□□□□□ -0.333e-6■■■■□ 22.9
MATR3P43243 NDUFS4-203ENST00000506765 559 ntTSL 212.5□□□□□ -0.413e-6■■■■□ 22.9
MATR3P43243 RNF123-207ENST00000457726 4506 ntTSL 1 (best)12.42□□□□□ -0.422e-8■■■■□ 22.9
MATR3P43243 RNF103-206ENST00000477307 1293 ntTSL 412.26□□□□□ -0.453e-6■■■■□ 22.9
MATR3P43243 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.453e-6■■■■□ 22.9
MATR3P43243 RPE-202ENST00000359429 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.461e-9■■■■□ 22.9
MATR3P43243 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.492e-8■■■■□ 22.9
MATR3P43243 RPE-214ENST00000452025 779 ntTSL 3 BASIC11.72□□□□□ -0.531e-9■■■■□ 22.9
MATR3P43243 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.583e-6■■■■□ 22.9
MATR3P43243 KDM6B-204ENST00000571047 362 ntTSL 511.4□□□□□ -0.583e-6■■■■□ 22.9
MATR3P43243 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.613e-6■■■■□ 22.9
MATR3P43243 ABCB1-202ENST00000416177 461 ntTSL 511.17□□□□□ -0.623e-6■■■■□ 22.9
MATR3P43243 RPE-206ENST00000429921 2511 ntTSL 1 (best) BASIC11.08□□□□□ -0.641e-9■■■■□ 22.9
MATR3P43243 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.653e-6■■■■□ 22.9
MATR3P43243 NDUFS4-204ENST00000506974 833 ntTSL 1 (best)10.84□□□□□ -0.673e-6■■■■□ 22.9
MATR3P43243 RPE-201ENST00000354506 3165 ntTSL 2 BASIC10.83□□□□□ -0.681e-9■■■■□ 22.9
MATR3P43243 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.693e-6■■■■□ 22.9
MATR3P43243 RNF103-202ENST00000463333 686 ntTSL 510.74□□□□□ -0.693e-6■■■■□ 22.9
MATR3P43243 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.693e-6■■■■□ 22.9
MATR3P43243 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.713e-6■■■■□ 22.9
MATR3P43243 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.743e-6■■■■□ 22.9
MATR3P43243 NDUFS4-202ENST00000502423 562 ntTSL 510.42□□□□□ -0.743e-6■■■■□ 22.9
MATR3P43243 ZMYM4-202ENST00000441447 466 ntTSL 510.36□□□□□ -0.758e-12■■■■□ 22.9
MATR3P43243 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC10.33□□□□□ -0.762e-6■■■■□ 22.9
MATR3P43243 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC10.22□□□□□ -0.774e-6■■■■□ 22.9
MATR3P43243 OSBPL10-203ENST00000429492 7723 ntTSL 210.09□□□□□ -0.793e-6■■■■□ 22.9
MATR3P43243 MAP4-206ENST00000423088 899 ntTSL 39.89□□□□□ -0.833e-6■■■■□ 22.9
MATR3P43243 ITGA9-AS1-219ENST00000630986 588 ntTSL 29.84□□□□□ -0.833e-6■■■■□ 22.9
MATR3P43243 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC9.79□□□□□ -0.843e-6■■■■□ 22.9
Retrieved 100 of 16,209 protein–RNA pairs in 112.1 ms