Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSKP43235 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSKP43235 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTSKP43235 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSKP43235 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTSKP43235 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSKP43235 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.52■□□□□ 0.88
CTSKP43235 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTSKP43235 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CTSKP43235 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.52■□□□□ 0.88
CTSKP43235 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSKP43235 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
CTSKP43235 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CTSKP43235 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CTSKP43235 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTSKP43235 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTSKP43235 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.51■□□□□ 0.87
CTSKP43235 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.51■□□□□ 0.87
CTSKP43235 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTSKP43235 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSKP43235 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.51■□□□□ 0.87
CTSKP43235 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.5■□□□□ 0.87
CTSKP43235 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CTSKP43235 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.5■□□□□ 0.87
CTSKP43235 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CTSKP43235 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTSKP43235 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.5■□□□□ 0.87
CTSKP43235 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.5■□□□□ 0.87
CTSKP43235 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.5■□□□□ 0.87
CTSKP43235 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTSKP43235 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSKP43235 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSKP43235 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.49■□□□□ 0.87
CTSKP43235 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 AC060766.5-201ENST00000590539 871 ntBASIC20.49■□□□□ 0.87
CTSKP43235 HLA-B-256ENST00000639848 1089 ntBASIC20.49■□□□□ 0.87
CTSKP43235 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CTSKP43235 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSKP43235 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CTSKP43235 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CTSKP43235 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTSKP43235 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 AL596275.1-201ENST00000423464 877 ntBASIC20.48■□□□□ 0.87
CTSKP43235 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.48■□□□□ 0.87
CTSKP43235 RPS2P4-201ENST00000476944 856 ntBASIC20.48■□□□□ 0.87
CTSKP43235 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.48■□□□□ 0.87
CTSKP43235 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.48■□□□□ 0.87
CTSKP43235 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 AC008403.3-201ENST00000598924 454 ntBASIC20.48■□□□□ 0.87
CTSKP43235 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.48■□□□□ 0.87
CTSKP43235 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CTSKP43235 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.48■□□□□ 0.87
CTSKP43235 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSKP43235 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CTSKP43235 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTSKP43235 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTSKP43235 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTSKP43235 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTSKP43235 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTSKP43235 MCRIP2P1-201ENST00000394346 511 ntBASIC20.47■□□□□ 0.87
CTSKP43235 UNC93B4-201ENST00000505679 747 ntBASIC20.47■□□□□ 0.87
CTSKP43235 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms