Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 KRT18P20-201ENST00000548986 1279 ntBASIC18.94■□□□□ 0.62
SLC1A3P43003 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC1A3P43003 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC1A3P43003 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC1A3P43003 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC1A3P43003 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC1A3P43003 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A3P43003 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC1A3P43003 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A3P43003 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A3P43003 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC1A3P43003 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SLC1A3P43003 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC1A3P43003 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A3P43003 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A3P43003 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SLC1A3P43003 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC1A3P43003 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.92■□□□□ 0.62
SLC1A3P43003 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A3P43003 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A3P43003 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLC1A3P43003 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
SLC1A3P43003 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SLC1A3P43003 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A3P43003 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SLC1A3P43003 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A3P43003 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A3P43003 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A3P43003 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC1A3P43003 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 SLC7A5P2-201ENST00000553010 536 ntBASIC18.91■□□□□ 0.62
SLC1A3P43003 RARRES2P6-201ENST00000567333 442 ntBASIC18.91■□□□□ 0.62
SLC1A3P43003 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC1A3P43003 AC087623.3-201ENST00000607047 1098 ntBASIC18.91■□□□□ 0.62
SLC1A3P43003 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SLC1A3P43003 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A3P43003 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A3P43003 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A3P43003 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC1A3P43003 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SLC1A3P43003 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A3P43003 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC1A3P43003 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC1A3P43003 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A3P43003 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A3P43003 KRT18P61-201ENST00000585825 1298 ntBASIC18.9■□□□□ 0.62
SLC1A3P43003 NTF6G-201ENST00000591094 616 ntBASIC18.9■□□□□ 0.62
SLC1A3P43003 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC1A3P43003 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A3P43003 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A3P43003 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC1A3P43003 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.89■□□□□ 0.62
SLC1A3P43003 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC1A3P43003 AC121338.2-201ENST00000622535 1744 ntBASIC18.89■□□□□ 0.61
SLC1A3P43003 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
SLC1A3P43003 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SLC1A3P43003 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC1A3P43003 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 AC245052.3-201ENST00000450182 901 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms