Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YDR203WYDR203W 318 nt2.12□□□□□ -2.07
CDC40P40968 RSM28YDR494W 1086 nt2.12□□□□□ -2.07
CDC40P40968 COG2YGR120C 789 nt2.12□□□□□ -2.07
CDC40P40968 YHL006W-AYHL006W-A 354 nt2.12□□□□□ -2.07
CDC40P40968 YAL066WYAL066W 309 nt2.12□□□□□ -2.07
CDC40P40968 RPS17AYML024W 411 nt2.12□□□□□ -2.07
CDC40P40968 YMR173W-AYMR173W-A 1185 nt2.12□□□□□ -2.07
CDC40P40968 END3YNL084C 1050 nt2.12□□□□□ -2.07
CDC40P40968 JID1YPR061C 906 nt2.12□□□□□ -2.07
CDC40P40968 YBR277CYBR277C 402 nt2.12□□□□□ -2.07
CDC40P40968 SGS1YMR190C 4344 nt2.12□□□□□ -2.07
CDC40P40968 CBF2YGR140W 2871 nt2.12□□□□□ -2.07
CDC40P40968 UBX3YDL091C 1368 nt2.11□□□□□ -2.07
CDC40P40968 AFI1YOR129C 2682 nt2.11□□□□□ -2.07
CDC40P40968 SDC1YDR469W 528 nt2.11□□□□□ -2.07
CDC40P40968 RPS26BYER131W 360 nt2.11□□□□□ -2.07
CDC40P40968 YER158W-AYER158W-A 216 nt2.11□□□□□ -2.07
CDC40P40968 LIN1YHR156C 1023 nt2.11□□□□□ -2.07
CDC40P40968 YIR020C-BYIR020C-B 735 nt2.11□□□□□ -2.07
CDC40P40968 VPS63YLR261C 327 nt2.11□□□□□ -2.07
CDC40P40968 JIP3YLR331C 378 nt2.11□□□□□ -2.07
CDC40P40968 SMA2YML066C 1110 nt2.11□□□□□ -2.07
CDC40P40968 IGO1YNL157W 507 nt2.11□□□□□ -2.07
CDC40P40968 YOL150CYOL150C 312 nt2.11□□□□□ -2.07
CDC40P40968 SFM1YOR021C 642 nt2.11□□□□□ -2.07
CDC40P40968 CAT5YOR125C 702 nt2.11□□□□□ -2.07
CDC40P40968 VID24YBR105C 1089 nt2.11□□□□□ -2.07
CDC40P40968 TRS130YMR218C 3309 nt2.11□□□□□ -2.07
CDC40P40968 STH1YIL126W 4080 nt2.11□□□□□ -2.07
CDC40P40968 TCB2YNL087W 3537 nt2.11□□□□□ -2.07
CDC40P40968 YMR045CYMR045C 5268 nt2.11□□□□□ -2.07
CDC40P40968 UBP15YMR304W 3693 nt2.1□□□□□ -2.07
CDC40P40968 YCR099CYCR099C 468 nt2.1□□□□□ -2.07
CDC40P40968 PRE1YER012W 597 nt2.1□□□□□ -2.07
CDC40P40968 FSH1YHR049W 732 nt2.1□□□□□ -2.07
CDC40P40968 RSA1YPL193W 1146 nt2.1□□□□□ -2.07
CDC40P40968 CLN3YAL040C 1743 nt2.09□□□□□ -2.07
CDC40P40968 PSO2YMR137C 1986 nt2.09□□□□□ -2.07
CDC40P40968 RRP6YOR001W 2202 nt2.09□□□□□ -2.07
CDC40P40968 YGL218WYGL218W 651 nt2.09□□□□□ -2.07
CDC40P40968 YGR107WYGR107W 450 nt2.09□□□□□ -2.07
CDC40P40968 YJL133C-AYJL133C-A 225 nt2.09□□□□□ -2.07
CDC40P40968 PAU23YLR037C 375 nt2.09□□□□□ -2.07
CDC40P40968 SAS2YMR127C 1017 nt2.09□□□□□ -2.07
CDC40P40968 YMR144WYMR144W 1029 nt2.09□□□□□ -2.07
CDC40P40968 PEX17YNL214W 600 nt2.09□□□□□ -2.07
CDC40P40968 YNR021WYNR021W 1215 nt2.09□□□□□ -2.07
CDC40P40968 RPS12YOR369C 432 nt2.09□□□□□ -2.07
CDC40P40968 ARR2YPR200C 393 nt2.09□□□□□ -2.07
CDC40P40968 ARP8YOR141C 2646 nt2.09□□□□□ -2.08
CDC40P40968 ECM5YMR176W 4236 nt2.08□□□□□ -2.08
CDC40P40968 OSW7YFR039C 1533 nt2.08□□□□□ -2.08
CDC40P40968 YDL032WYDL032W 312 nt2.08□□□□□ -2.08
CDC40P40968 PEX18YHR160C 852 nt2.08□□□□□ -2.08
CDC40P40968 UTP30YKR060W 825 nt2.08□□□□□ -2.08
CDC40P40968 YLR012CYLR012C 300 nt2.08□□□□□ -2.08
CDC40P40968 YLR366WYLR366W 306 nt2.08□□□□□ -2.08
CDC40P40968 YLR379WYLR379W 375 nt2.08□□□□□ -2.08
CDC40P40968 YMR316C-AYMR316C-A 312 nt2.08□□□□□ -2.08
CDC40P40968 YNL034WYNL034W 1839 nt2.07□□□□□ -2.08
CDC40P40968 YME2YMR302C 2553 nt2.07□□□□□ -2.08
CDC40P40968 KOG1YHR186C 4674 nt2.07□□□□□ -2.08
CDC40P40968 BCK1YJL095W 4437 nt2.07□□□□□ -2.08
CDC40P40968 YPK1YKL126W 2043 nt2.07□□□□□ -2.08
CDC40P40968 15S_rRNA15S_rRNA 1649 nt2.07□□□□□ -2.08
CDC40P40968 YHR050W-AYHR050W-A 171 nt2.07□□□□□ -2.08
CDC40P40968 NSL1YPL233W 651 nt2.07□□□□□ -2.08
CDC40P40968 MSL5YLR116W 1431 nt2.07□□□□□ -2.08
CDC40P40968 FKS3YMR306W 5358 nt2.07□□□□□ -2.08
CDC40P40968 SNX41YDR425W 1878 nt2.06□□□□□ -2.08
CDC40P40968 RPL23BYER117W 414 nt2.06□□□□□ -2.08
CDC40P40968 YGR115CYGR115C 780 nt2.06□□□□□ -2.08
CDC40P40968 YGR242WYGR242W 309 nt2.06□□□□□ -2.08
CDC40P40968 CAP1YKL007W 807 nt2.06□□□□□ -2.08
CDC40P40968 YET1YKL065C 621 nt2.06□□□□□ -2.08
CDC40P40968 BET3YKR068C 582 nt2.06□□□□□ -2.08
CDC40P40968 YOR169CYOR169C 465 nt2.06□□□□□ -2.08
CDC40P40968 ADF1YCL058W-A 342 nt2.06□□□□□ -2.08
CDC40P40968 SEC16YPL085W 6588 nt2.06□□□□□ -2.08
CDC40P40968 SVL3YPL032C 2478 nt2.06□□□□□ -2.08
CDC40P40968 RGA2YDR379W 3030 nt2.05□□□□□ -2.08
CDC40P40968 YDR199WYDR199W 366 nt2.05□□□□□ -2.08
CDC40P40968 COX3Q0275 810 nt2.05□□□□□ -2.08
CDC40P40968 VPS51YKR020W 495 nt2.05□□□□□ -2.08
CDC40P40968 YLR154W-EYLR154W-E 204 nt2.05□□□□□ -2.08
CDC40P40968 COA4YLR218C 453 nt2.05□□□□□ -2.08
CDC40P40968 YNL226WYNL226W 411 nt2.05□□□□□ -2.08
CDC40P40968 SWM2YNR004W 441 nt2.05□□□□□ -2.08
CDC40P40968 VPS38YLR360W 1320 nt2.05□□□□□ -2.08
CDC40P40968 URK1YNR012W 1506 nt2.05□□□□□ -2.08
CDC40P40968 YPL216WYPL216W 3309 nt2.04□□□□□ -2.08
CDC40P40968 GDI1YER136W 1356 nt2.04□□□□□ -2.08
CDC40P40968 YGL165CYGL165C 579 nt2.04□□□□□ -2.08
CDC40P40968 PRS3YHL011C 963 nt2.04□□□□□ -2.08
CDC40P40968 SSF1YHR066W 1362 nt2.04□□□□□ -2.08
CDC40P40968 PDP3YLR455W 915 nt2.04□□□□□ -2.08
CDC40P40968 VTI1YMR197C 654 nt2.04□□□□□ -2.08
CDC40P40968 SRL4YPL033C 846 nt2.04□□□□□ -2.08
CDC40P40968 YBR209WYBR209W 318 nt2.04□□□□□ -2.08
CDC40P40968 GIN4YDR507C 3429 nt2.04□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms